{ "model": { "rank": 3564, "code": "thing-q164386", "model_id": "vr.tr.hypothalamus", "name": "hypothalamus", "purpose": "Enable an agent to identify a hypothalamus, record its anatomical and regulatory state, and judge which observations or interventions require additional evidence or specialist oversight.", "family": "Thing Registry", "category": "Physical world and living systems", "status": "research-draft", "kind": "thing", "plane": "PHY", "domain": "PHY.LIV", "industry": "", "version": "", "url": "/models/thing/q164386/", "tier": 2, "score": 84, "payload": { "layer": "wikidata", "aliases": [], "aliasCount": 0, "merged": 0, "knownIn": 84, "facets": null, "markers": [], "lexicalClass": "", "senseRank": null, "alsoRegisteredAs": "vr.tr.hypothalamus", "source": { "dataset": "wikidata", "item": "Q164386", "url": "https://www.wikidata.org/wiki/Q164386", "license": "CC0 1.0" } }, "research": { "vercy": "1.0-draft", "publication": { "status": "research-draft", "adjudicationStatus": "unreviewed", "publishableCanonical": false, "generatedAt": "2026-09-07T14:33:59Z", "providers": [ "Codex" ], "breadth": "recalled by Codex without web access - no source was read", "missingProviders": [], "pass": 2, "cost": { "grok": { "seconds": 21.9, "error": "Reading additional input from stdin...\nOpenAI Codex v0.153.3\n--------\nworkdir: R:\\02_PROJECTS\\02_Meta_Models_Platforms\\Ver.cy\\current\\thing-registry-backlog\nmodel: gpt-6-astra\nprovider: openai\napproval: never\nsandbox: read-only\nreasoning effort: none\nreasoning summaries: none\nsession id: 01a07c49-1fda-7ba2-8da6-a751ec6b1ae9\n--------\nuser\nDescribe what is already known about one registered thing. Answer as JSON only, no prose around it.\n\nThing: hypothalamus\nSense to describe: (none recorded)\nDomain code: PHY.LIV\nAlso known as: (none)\n\n\nContext for this batch of 1001 things:\n# Batch 004: 1001 re", "usd": 0, "recall": true }, "codex": { "seconds": 77.9, "error": "Reading additional input from stdin...\nOpenAI Codex v0.153.3\n--------\nworkdir: R:\\02_PROJECTS\\02_Meta_Models_Platforms\\Ver.cy\\current\\thing-registry-backlog\nmodel: gpt-6-astra\nprovider: openai\napproval: never\nsandbox: read-only\nreasoning effort: none\nreasoning summaries: none\nsession id: 01a07c49-1fe1-7032-bcb7-6f1e4f089ac7\n--------\nuser\nYou are drafting a Vercy meta-model for one registered thing. Answer as JSON only, no prose around it.\n\nThing: hypothalamus\nRegistry id: vr.tr.hypothalamus\nPlane / domain: PHY / PHY.LIV\nRegistry definition: (none recorded)\nNames folded into this entry: (none)\n" } } }, "metaModel": { "id": "THING-Q164386", "registryId": "vr.tr.hypothalamus", "name": "hypothalamus", "version": "0.1.0-research.1", "entryKind": "thing", "family": "Thing Registry", "domain": [ "PHY.LIV" ], "status": "research-draft" }, "canonicalUrl": "https://ver.cy/models/thing/q164386/", "model": { "registry_id": "vr.tr.hypothalamus", "name": "hypothalamus", "purpose": "Enable an agent to identify a hypothalamus, record its anatomical and regulatory state, and judge which observations or interventions require additional evidence or specialist oversight.", "definition": "The hypothalamus is a region of the vertebrate diencephalon that integrates neural and hormonal signals to coordinate endocrine, autonomic and behavioural functions involved in homeostasis, reproduction and biological rhythms.", "scope_statement": "This model owns the hypothalamus as a vertebrate brain region, including its subdivisions, neuroendocrine interfaces and contributions to physiological regulation, with species, developmental stage and observation method made explicit.", "in_scope": [ "Anatomical boundaries, laterality, subdivisions and relationships to surrounding brain structures", "Hypothalamic cell populations, connections and neurosecretory interfaces", "Contributions to temperature, fluid, energy, circadian and reproductive regulation", "Structural and functional observations tied to a particular organism and physiological context", "Evidence supporting attribution of dysfunction or intervention effects to hypothalamic tissue" ], "out_of_scope": [ "Whole-organism taxonomy, habitat, range and conservation assessment", "The pituitary gland as a separately modelled anatomical structure", "Complete models of peripheral endocrine glands and circulating hormones", "Whole-brain anatomy and neural systems beyond their hypothalamic interfaces", "Standalone disease classifications, diagnostic protocols and treatment guidelines", "Imaging instruments, laboratory assays and surgical devices themselves" ], "distinguishing_features": [ "Identify a brain region in the ventral diencephalon associated with the third ventricle; proximity alone does not establish its precise boundaries.", "Distinguish hypothalamic tissue from the adjacent thalamus using an identified species-specific anatomical reference.", "Distinguish the hypothalamus from the pituitary: the hypothalamus is neural tissue connected to the gland, rather than the gland itself.", "Require subdivision or cell-population evidence before assigning a regulatory function to a particular hypothalamic location.", "Treat the entry as an anatomical region of an organism, not as a species, an endocrine hormone or the entire homeostatic control system." ], "characteristics": [ { "name": "Biological subject", "kind": "relation", "unit_or_values": "Organism or specimen identifier, species and developmental stage", "why_it_matters": "Anatomical references and physiological interpretations depend on the organism and its stage of development." }, { "name": "Anatomical reference and subdivision", "kind": "category", "unit_or_values": "Named atlas and version; region, nucleus or area; left, right or bilateral; unresolved", "why_it_matters": "Prevents incompatible anatomical naming systems from being treated as equivalent." }, { "name": "Spatial extent", "kind": "measurement", "unit_or_values": "Coordinates in a declared reference space; volume in mm³ when measurable; segmentation uncertainty", "why_it_matters": "Supports localisation and comparison without treating uncertain boundaries as exact." }, { "name": "Tissue condition", "kind": "state", "unit_or_values": "No abnormality detected by stated method, altered, indeterminate or not assessed; associated observation", "why_it_matters": "Separates observed tissue changes from assumptions about regulatory function." }, { "name": "Cell-population identity", "kind": "category", "unit_or_values": "Anatomical location, measured molecular markers and classification method; unresolved", "why_it_matters": "Different cell populations within the same region can have different projections and effects." }, { "name": "Circuit or endocrine connection", "kind": "relation", "unit_or_values": "Source, target, direction, neural or vascular route, and evidence type", "why_it_matters": "Distinguishes direct connections from indirect physiological associations." }, { "name": "Functional observation", "kind": "measurement", "unit_or_values": "Method-specific activity measure and unit, sampling interval, baseline and uncertainty", "why_it_matters": "Electrical recordings, imaging signals and molecular readouts are not interchangeable measures of function." }, { "name": "Regulatory context", "kind": "state", "unit_or_values": "Sleep-wake phase, feeding and hydration state, thermal conditions, stress context and reproductive context", "why_it_matters": "A response can be expected in one physiological context and abnormal in another." } ], "affordances": [ "Locate and annotate hypothalamic tissue against a declared anatomical reference.", "Associate observations with specific subdivisions, cell populations and physiological conditions.", "Trace supported neural and endocrine interfaces to neighbouring models.", "Compare structural or functional observations across time using compatible methods.", "Identify missing evidence before attributing a physiological disturbance to hypothalamic dysfunction.", "Assess the anatomical reach, evidential support and oversight requirements of a proposed observation or intervention." ] }, "sources": [], "structure": { "bundles": [ { "id": "anatomical-identity", "name": "Anatomical identity", "description": "Establish which tissue is being called hypothalamus and at what anatomical resolution.", "rationale": "A regional label cannot support precise functional claims without explicit boundaries and subdivision conventions.", "layers": [ { "id": "regional-boundaries", "name": "Regional boundaries", "description": "Locate the hypothalamus within the relevant organism and anatomical reference.", "findings": [ { "id": "reference-bound-localisation", "name": "Reference-bound localisation", "description": "Record the landmarks, reference space and uncertainty used to distinguish hypothalamic tissue from neighbouring structures.", "questions": [ { "text": "Which species, developmental stage and anatomical reference define the hypothalamic boundaries in this record?", "kind": "definition", "id": "reference-bound-localisation-q01" }, { "text": "Where does the observation overlap the thalamus, preoptic region, pituitary stalk or other boundary-sensitive structures?", "kind": "boundary", "id": "reference-bound-localisation-q02" } ] } ] }, { "id": "subdivision-resolution", "name": "Subdivision resolution", "description": "Represent nuclei, areas and laterality only as precisely as the evidence permits.", "findings": [ { "id": "supported-subdivision-assignment", "name": "Supported subdivision assignment", "description": "Separate directly resolved subdivisions from labels inferred through atlas registration or cross-species correspondence.", "questions": [ { "text": "Which nucleus or area and side can the observation method actually resolve?", "kind": "measurement", "id": "supported-subdivision-assignment-q01" }, { "text": "Is the subdivision label directly observed, atlas-derived or inferred from another species?", "kind": "provenance", "id": "supported-subdivision-assignment-q02" } ] } ] } ] }, { "id": "cells-and-circuits", "name": "Cells and circuits", "description": "Describe the cellular populations and connections relevant to a hypothalamic observation.", "rationale": "A hypothalamic subdivision contains heterogeneous cells, and regional activity alone does not identify the responsible circuit.", "layers": [ { "id": "cell-populations", "name": "Cell populations", "description": "Identify neuronal and non-neuronal populations using evidence appropriate to the specimen.", "findings": [ { "id": "population-identity-evidence", "name": "Population identity evidence", "description": "Record location, markers and identification method without treating a marker as a complete functional identity.", "questions": [ { "text": "Which measured markers and anatomical features support the stated cell-population identity?", "kind": "provenance", "id": "population-identity-evidence-q01" }, { "text": "Does the observation concern a defined population, mixed tissue or a signal whose cellular origin is unresolved?", "kind": "boundary", "id": "population-identity-evidence-q02" } ] } ] }, { "id": "neural-connectivity", "name": "Neural connectivity", "description": "Record inputs and outputs connecting hypothalamic populations to other neural structures.", "findings": [ { "id": "connection-strength-of-evidence", "name": "Connection strength of evidence", "description": "Distinguish anatomical projections, demonstrated functional influence and correlated activity.", "questions": [ { "text": "What evidence establishes the source, target and direction of the proposed connection?", "kind": "provenance", "id": "connection-strength-of-evidence-q01" }, { "text": "Does the evidence demonstrate a direct connection, an indirect pathway or only correlated activity?", "kind": "boundary", "id": "connection-strength-of-evidence-q02" } ] } ] } ] }, { "id": "neuroendocrine-interfaces", "name": "Neuroendocrine interfaces", "description": "Represent hypothalamic control and feedback relationships involving the pituitary and endocrine signals.", "rationale": "Neural production, vascular delivery, pituitary secretion and peripheral feedback must remain distinguishable.", "layers": [ { "id": "pituitary-output-routes", "name": "Pituitary output routes", "description": "Distinguish hypothalamic signals reaching the anterior pituitary from axonal neurosecretory routes to the posterior pituitary.", "findings": [ { "id": "production-delivery-release", "name": "Production, delivery and release", "description": "Record the producing population, signal, delivery route and release site as separate attributes.", "questions": [ { "text": "Which hypothalamic population produces the signal, and by what route does it reach its release site or target?", "kind": "definition", "id": "production-delivery-release-q01" }, { "text": "Which parts of the observation belong to hypothalamic tissue, the pituitary stalk or the pituitary gland?", "kind": "boundary", "id": "production-delivery-release-q02" } ] } ] }, { "id": "feedback-and-timing", "name": "Feedback and timing", "description": "Interpret endocrine relationships with attention to feedback, pulsatility and sampling conditions.", "findings": [ { "id": "endocrine-attribution", "name": "Endocrine attribution", "description": "Treat peripheral hormone measurements as evidence requiring interpretation rather than direct measurements of hypothalamic output.", "questions": [ { "text": "What sampling times, assay methods and physiological conditions accompany the hormone measurements?", "kind": "measurement", "id": "endocrine-attribution-q01" }, { "text": "What evidence distinguishes a hypothalamic contribution from pituitary, peripheral-gland or medication effects?", "kind": "boundary", "id": "endocrine-attribution-q02" } ] } ] } ] }, { "id": "physiological-regulation", "name": "Physiological regulation", "description": "Relate hypothalamic observations to the regulated variables and behavioural responses they may influence.", "rationale": "Regulatory function is distributed and context-dependent; naming a function does not establish its state or causal origin.", "layers": [ { "id": "thermal-fluid-energy", "name": "Thermal, fluid and energy regulation", "description": "Track evidence concerning thermoregulation, thirst, fluid balance, feeding and energy expenditure.", "findings": [ { "id": "regulated-variable-response", "name": "Regulated variable and response", "description": "Pair the physiological variable with the relevant hypothalamic observation and downstream response.", "questions": [ { "text": "Which variables were measured, such as core temperature, plasma osmolality, intake or energy expenditure, and in what units?", "kind": "measurement", "id": "regulated-variable-response-q01" }, { "text": "What evidence connects the observed response to a specified hypothalamic population rather than to peripheral or other central mechanisms?", "kind": "provenance", "id": "regulated-variable-response-q02" } ] } ] }, { "id": "rhythms-and-contextual-states", "name": "Rhythms and contextual states", "description": "Represent circadian, sleep-wake, stress-related and reproductive context when interpreting hypothalamic function.", "findings": [ { "id": "phase-and-state-dependence", "name": "Phase and state dependence", "description": "Record timing and organism state before comparing observations or labelling responses atypical.", "questions": [ { "text": "What light-dark schedule, circadian phase, sleep state and reproductive or stress context apply to the observation?", "kind": "measurement", "id": "phase-and-state-dependence-q01" }, { "text": "Which evidence separates an expected state-dependent change from persistent regulatory dysfunction?", "kind": "boundary", "id": "phase-and-state-dependence-q02" } ] } ] } ] }, { "id": "assessment-and-action", "name": "Assessment and action", "description": "Connect observed abnormalities and proposed actions to localisation, uncertainty and consequences.", "rationale": "Small or incompletely localised changes can affect multiple regulatory systems, while symptoms alone may not localise a problem.", "layers": [ { "id": "structural-functional-assessment", "name": "Structural and functional assessment", "description": "Keep tissue appearance, activity measurements and organism-level manifestations distinct.", "findings": [ { "id": "abnormality-localisation", "name": "Abnormality localisation", "description": "Record whether an abnormality involves hypothalamic tissue directly, affects its connections or remains anatomically unresolved.", "questions": [ { "text": "What structural or functional change was detected, by which method and with what localisation uncertainty?", "kind": "measurement", "id": "abnormality-localisation-q01" }, { "text": "Could the observed effects arise from adjacent tissue, interrupted connections or a non-hypothalamic process?", "kind": "boundary", "id": "abnormality-localisation-q02" } ] } ] }, { "id": "intervention-interpretation", "name": "Intervention interpretation", "description": "Assess proposed recordings, sampling, stimulation or other interventions in their clinical or research context.", "findings": [ { "id": "target-and-consequence-review", "name": "Target and consequence review", "description": "Specify the intended target, likely spatial reach, monitored outcomes and applicable oversight before an action is considered executable.", "questions": [ { "text": "Which hypothalamic tissue or pathway would the action affect, and what adjacent structures or other regulatory functions could also be affected?", "kind": "boundary", "id": "target-and-consequence-review-q01" }, { "text": "What supporting evidence, qualified oversight and outcome monitoring are required for this proposed action?", "kind": "action", "id": "target-and-consequence-review-q02" } ] } ] } ] }, { "id": "evidence-and-external-alignment", "name": "Evidence and external alignment", "description": "What the world already says about this thing, gathered so the model can be checked against it.", "rationale": "A model that cannot be lined up against existing standards, identifiers and practice cannot be adopted by anyone who already uses them.", "layers": [ { "id": "reported-evidence", "name": "Reported evidence", "description": "Findings from the breadth pass, kept separate from the structural claims.", "findings": [ { "id": "evidence-confidence-notes", "name": "Check these first", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "This describes an anatomical structure, not an organism; taxonomic authority, species conservation status and native range do not apply.", "Human clinical examples are included, but anatomical subdivisions and experimental findings require species-specific interpretation.", "Exact ontology identifiers and quantitative anatomical reference ranges should be checked before publication; no sources were consulted for this recall-based description." ], "questions": [ { "id": "evidence-confidence-notes-q01", "text": "Which of these check these first hold for the sense of hypothalamus this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-identifiers", "name": "Identifiers and schemes", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ { "scheme": "Terminologia Anatomica", "value_or_pattern": "Hypothalamus", "note": "Standard anatomical name; identifies a brain region rather than an organism or taxon." }, { "scheme": "Uberon", "value_or_pattern": "UBERON: followed by seven digits", "note": "Cross-species anatomical ontology; the exact hypothalamus identifier requires verification." } ], "questions": [ { "id": "evidence-identifiers-q01", "text": "Which of these identifiers and schemes hold for the sense of hypothalamus this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-standards-and-regulation", "name": "Standards and regulation", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Terminologia Anatomica, maintained by the Federative International Programme for Anatomical Terminology (FIPAT), standardizes human anatomical terminology." ], "questions": [ { "id": "evidence-standards-and-regulation-q01", "text": "Which of these standards and regulation hold for the sense of hypothalamus this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-real-world-use", "name": "Real-world use", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Anatomical localization in brain imaging, neurosurgical planning and neuropathology.", "Clinical assessment of hypothalamic-pituitary endocrine disorders.", "Research on appetite, thirst, thermoregulation, sleep and circadian rhythms.", "Study of reproductive physiology, stress responses and autonomic regulation." ], "questions": [ { "id": "evidence-real-world-use-q01", "text": "Which of these real-world use hold for the sense of hypothalamus this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-failure-modes-and-hazards", "name": "Failure modes and hazards", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Damage can disrupt pituitary hormone regulation, affecting growth, thyroid function, adrenal function and reproduction.", "Disruption of hypothalamic vasopressin production or its transport to the posterior pituitary can cause central diabetes insipidus.", "Injury to appetite and energy-balance circuits can contribute to hypothalamic obesity.", "Dysfunction can impair temperature regulation, thirst, sleep and circadian timing.", "Tumours, inflammation, trauma or treatment-related injury near the hypothalamus can affect several regulatory functions simultaneously." ], "questions": [ { "id": "evidence-failure-modes-and-hazards-q01", "text": "Which of these failure modes and hazards hold for the sense of hypothalamus this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-regional-variation", "name": "Regional variation", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Across vertebrate species, hypothalamic organization shares conserved features, but nuclear boundaries, nomenclature and functional specializations differ." ], "questions": [ { "id": "evidence-regional-variation-q01", "text": "Which of these regional variation hold for the sense of hypothalamus this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-neighbours", "name": "Neighbouring kinds and how to tell them apart", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ { "name": "thalamus", "difference": "Both belong to the diencephalon; the thalamus lies predominantly dorsal to the hypothalamus and principally supports information processing and relay through cortical circuits." }, { "name": "pituitary gland", "difference": "The pituitary is a distinct endocrine organ connected to the hypothalamus by the infundibulum; hypothalamic signals regulate its secretion." }, { "name": "hypothalamic nucleus", "difference": "A nucleus is a constituent group of neurons within the hypothalamus, not the entire region." }, { "name": "hypothalamic-pituitary axis", "difference": "The axis is a functional signalling relationship involving multiple structures, whereas the hypothalamus is an anatomical region." }, { "name": "hypothalamic hamartoma", "difference": "A hamartoma is a developmental malformation associated with the hypothalamic region, not normal hypothalamic anatomy." } ], "questions": [ { "id": "evidence-neighbours-q01", "text": "Which of these neighbouring kinds and how to tell them apart hold for the sense of hypothalamus this model covers, and on what evidence?", "kind": "provenance" } ] } ] } ] } ] }, "openQuestions": [ "Which species-specific anatomical references should govern this model, and how should disagreements about the preoptic region and other boundaries be represented?", "Which subdivision and cell-population correspondences are sufficiently supported for comparison across vertebrate species?", "What reference ranges and temporal sampling requirements are appropriate for each functional measure and physiological context?", "What minimum evidence should support causal attribution of a regulatory disturbance to a particular hypothalamic population or pathway?", "Does the existing Vercy catalogue already contain a hypothalamus model or authoritative parent model that this entry should link to rather than duplicate?" ], "statistics": { "bundles": 6, "layers": 11, "findings": 17, "questions": 27 } }, "draft": { "generator": "vr.draft.v3", "status": "draft-generated", "researched": false, "archetype": "organism", "method": "Written from the archetype playbook - what this kind of thing needs beyond identity and provenance - and from the structure that recurred across 6,333 models already researched by two engines. Applied to this entry by rule. No source was read for this thing and no claim here is researched. This entry carries no facets of its own, so they were inferred from its domain - a guess about a whole domain applied to one thing.", "facetsInferred": true, "nextPass": "A researcher replaces this draft with a sourced specification. Treat every sentence below as a proposal to argue with.", "purpose": "Give an agent a durable, checkable way to recognise a hypothalamus, record what state it is in, and decide what may be done with it.", "whatItIs": "Enable an agent to identify a hypothalamus, record its anatomical and regulatory state, and judge which observations or interventions require additional evidence or specialist oversight.", "characteristics": { "substance": "living", "origin": "natural", "agency": "autonomous", "mobility": "self-moving" }, "whatYouCanDoWithIt": [ "observed and measured" ], "distinguishingFeatures": [ "Described in 84 Wikipedia languages, which is a measure of how widely the thing is known, not of how important it is." ], "openQuestionsForResearch": [ "Which of the bundles below does a real task actually need, and which are ceremony?", "What does this thing have that the facets do not capture at all?", "Which neighbouring kind is most often confused with a hypothalamus, and on what evidence are they told apart?" ], "whatItIsMadeOf": "a living thing", "physicalCharacter": [ "Moves under its own power or of its own accord.", "Acts on its own behalf.", "These come from the domain this entry sits in rather than from the entry itself, so treat them as a first guess about the whole domain applied to one thing." ], "whatCanBeDoneWithIt": [ "observe it, measure it, record its state" ], "howItIsRecognised": [ "Recognised by diagnostic characters, and those differ by life stage - the young of many kinds are mistaken for other kinds entirely. A sighting is settled by characters, a photograph and a place, not by a name alone." ], "relatedModels": [], "standing": "Described in 84 Wikipedia languages, which measures how widely it is written about rather than how important or how common it is.", "structure": { "bundles": [ { "id": "identity-and-classification", "name": "Identity, naming and classification", "description": "How an agent tells one hypothalamus from another, and a hypothalamus from things that resemble it.", "rationale": "Recognition comes before every other claim. Without stable identity nothing else in the model can be trusted to be about the same thing twice.", "layers": [ { "id": "naming-and-identifiers", "name": "Names and identifiers", "description": "The names this thing goes by and the identifiers that survive translation and time.", "findings": [ { "id": "preferred-name-and-aliases", "name": "Preferred name, aliases and local names", "description": "Which name to use, which names mean the same thing, and which merely sound similar.", "questions": [ { "id": "preferred-name-and-aliases-q01", "text": "What identifies and describes the name of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "preferred-name-and-aliases-q02", "text": "Who or what asserted this about the name of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "preferred-name-and-aliases-q03", "text": "What may an agent decide or do once the name of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] }, { "id": "stable-identifiers", "name": "Stable identifiers and external keys", "description": "Identifiers that keep pointing at this kind of thing across systems and languages.", "questions": [ { "id": "stable-identifiers-q01", "text": "What identifies and describes an identifier for a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "stable-identifiers-q02", "text": "Who or what asserted this about an identifier for a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "stable-identifiers-q03", "text": "What may an agent decide or do once an identifier for a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] }, { "id": "classification-and-granularity", "name": "Classification and granularity", "description": "Where a hypothalamus sits among kinds, and how finely a task needs to cut it.", "findings": [ { "id": "kind-and-parents", "name": "Kind, parents and neighbouring kinds", "description": "The classes this thing belongs to and the ones it is next to.", "questions": [ { "id": "kind-and-parents-q01", "text": "What identifies and describes the kind of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "kind-and-parents-q02", "text": "Who or what asserted this about the kind of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "kind-and-parents-q03", "text": "What may an agent decide or do once the kind of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] }, { "id": "distinguishing-features", "name": "Distinguishing features", "description": "What separates a hypothalamus from the things most often confused with it.", "questions": [ { "id": "distinguishing-features-q01", "text": "What identifies and describes what distinguishes a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "distinguishing-features-q02", "text": "Who or what asserted this about what distinguishes a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "distinguishing-features-q03", "text": "What may an agent decide or do once what distinguishes a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] } ] }, { "id": "form-and-composition", "name": "Form, composition and condition", "description": "What a hypothalamus is made of, what shape and size it takes, and what state it is in.", "rationale": "A physical thing can be measured, and a model that cannot record its measurements cannot support any decision that depends on them.", "layers": [ { "id": "form-and-dimensions", "name": "Form and dimensions", "description": "Shape, size, mass and the ranges these take across examples.", "findings": [ { "id": "measurable-dimensions", "name": "Measurable dimensions and their units", "description": "The quantities worth recording and the units they are recorded in.", "questions": [ { "id": "measurable-dimensions-q01", "text": "What identifies and describes the dimensions of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "measurable-dimensions-q02", "text": "Who or what asserted this about the dimensions of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "measurable-dimensions-q03", "text": "What may an agent decide or do once the dimensions of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] }, { "id": "material-and-composition", "name": "Material and composition", "description": "Anatomy, parts and life stage.", "findings": [ { "id": "parts-and-materials", "name": "Parts and life stages", "description": "The parts of a hypothalamus and the stages it passes through.", "questions": [ { "id": "parts-and-materials-q01", "text": "What identifies and describes the composition of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "parts-and-materials-q02", "text": "Who or what asserted this about the composition of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "parts-and-materials-q03", "text": "What may an agent decide or do once the composition of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] }, { "id": "condition-and-integrity", "name": "Condition and integrity", "description": "Wear, damage, health and the difference between working and broken.", "findings": [ { "id": "condition-assessment", "name": "Condition, damage and health", "description": "How the condition of a hypothalamus is judged and by whom.", "questions": [ { "id": "condition-assessment-q01", "text": "What identifies and describes the condition of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "condition-assessment-q02", "text": "Who or what asserted this about the condition of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "condition-assessment-q03", "text": "What may an agent decide or do once the condition of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] } ] }, { "id": "place-and-movement", "name": "Place and movement", "description": "Where a hypothalamus is, how it got there and where it may go (self-moving).", "rationale": "A thing that can move needs its position recorded with a time, or every later claim about it is about a place it has left.", "layers": [ { "id": "location-and-placement", "name": "Location and placement", "description": "Position, containment and the reference frame the position is given in.", "findings": [ { "id": "position-and-frame", "name": "Position, container and reference frame", "description": "Where a hypothalamus is, and what that position is measured against.", "questions": [ { "id": "position-and-frame-q01", "text": "What identifies and describes the location of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "position-and-frame-q02", "text": "Who or what asserted this about the location of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "position-and-frame-q03", "text": "What may an agent decide or do once the location of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] }, { "id": "movement-and-transfer", "name": "Movement and transfer", "description": "How a hypothalamus moves on its own.", "findings": [ { "id": "movement-events", "name": "Movement events and constraints", "description": "What counts as a movement, what records it and what limits it.", "questions": [ { "id": "movement-events-q01", "text": "What identifies and describes the movement of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "movement-events-q02", "text": "Who or what asserted this about the movement of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "movement-events-q03", "text": "What may an agent decide or do once the movement of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] } ] }, { "id": "state-and-lifecycle", "name": "State and lifecycle", "description": "The states a hypothalamus passes through and the events that move it between them.", "rationale": "Most decisions about a thing depend on what state it is in now, which is a claim with a time on it, not a property.", "layers": [ { "id": "lifecycle-stages", "name": "Lifecycle stages", "description": "From coming into existence to ceasing to be one of these.", "findings": [ { "id": "stages-and-transitions", "name": "Stages and transitions", "description": "The stages worth naming and what moves a hypothalamus between them.", "questions": [ { "id": "stages-and-transitions-q01", "text": "What identifies and describes the lifecycle of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "stages-and-transitions-q02", "text": "Who or what asserted this about the lifecycle of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "stages-and-transitions-q03", "text": "What may an agent decide or do once the lifecycle of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] }, { "id": "observations-and-status", "name": "Observations and current status", "description": "What is observed about a hypothalamus, how often and by whom.", "findings": [ { "id": "observation-record", "name": "Observation record", "description": "How an observation of a hypothalamus is recorded so that it can be superseded rather than overwritten.", "questions": [ { "id": "observation-record-q01", "text": "What identifies and describes an observation of a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "observation-record-q02", "text": "Who or what asserted this about an observation of a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "observation-record-q03", "text": "What may an agent decide or do once an observation of a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] } ] }, { "id": "taxonomic-placement", "name": "Taxonomic placement and identification", "description": "What hypothalamus is called scientifically, by whose authority, and how a specimen is recognised.", "rationale": "Names change with revisions while the organism does not, so a name without its authority and date cannot be reconciled later.", "layers": [ { "id": "accepted-name", "name": "Accepted name and synonymy", "description": "The current binomial, its author and date, and the names it replaced.", "findings": [ { "id": "name-and-authority", "name": "Accepted name, authority and synonyms", "description": "What to record so a later revision can be applied without losing the old data.", "questions": [ { "id": "name-and-authority-q01", "text": "What is the accepted scientific name of hypothalamus, with its author and year, and which synonyms does it absorb?", "kind": "definition" }, { "id": "name-and-authority-q02", "text": "Which taxonomic authority is being followed, and what would a competing authority say?", "kind": "provenance" } ] } ] }, { "id": "field-identification", "name": "Field identification", "description": "The characters that separate hypothalamus from what it is confused with.", "findings": [ { "id": "diagnostic-characters", "name": "Diagnostic characters and confusable kinds", "description": "Features that settle an identification, and those that only suggest it.", "questions": [ { "id": "diagnostic-characters-q01", "text": "Which observable characters distinguish hypothalamus from its closest look-alikes, and at which life stage are they visible?", "kind": "boundary" }, { "id": "diagnostic-characters-q02", "text": "What evidence is enough to record an identification as confirmed rather than provisional?", "kind": "provenance" } ] } ] } ] }, { "id": "life-cycle-and-condition", "name": "Life stages, condition and behaviour", "description": "What hypothalamus does over its life and how its state is judged.", "rationale": "Stage and condition change what may be done - handled, treated, harvested, left alone - and both are observations with a time.", "layers": [ { "id": "stages-and-reproduction", "name": "Stages and reproduction", "description": "Development from origin to death, including forms that look like different animals.", "findings": [ { "id": "life-stages", "name": "Life stages and their marks", "description": "The stages worth recording and what tells them apart.", "questions": [ { "id": "life-stages-q01", "text": "What stages does hypothalamus pass through, and what observable change marks each transition?", "kind": "definition" }, { "id": "life-stages-q02", "text": "Which stages are so unlike the adult that they are mistaken for another kind?", "kind": "boundary" } ] } ] }, { "id": "health-and-condition", "name": "Health and condition", "description": "How condition is assessed and by whom.", "findings": [ { "id": "condition-assessment", "name": "Condition assessment", "description": "Signs of health, injury and stress, and who is competent to judge them.", "questions": [ { "id": "condition-assessment-q01", "text": "How is the condition of hypothalamus judged, on what scale, and by whom?", "kind": "measurement" }, { "id": "condition-assessment-q02", "text": "What condition obliges an agent to act, and what act is permitted to whom?", "kind": "action" } ] } ] } ] }, { "id": "range-and-status", "name": "Habitat, range and conservation status", "description": "Where hypothalamus lives and how threatened it is.", "rationale": "Range and status govern what is lawful, and both are assessments with an assessor and a year rather than facts of nature.", "layers": [ { "id": "habitat-and-range", "name": "Habitat and range", "description": "Native range, introductions and the habitat it needs.", "findings": [ { "id": "range-record", "name": "Range, introductions and habitat", "description": "What to record about where it is found and how it got there.", "questions": [ { "id": "range-record-q01", "text": "What is the native range of hypothalamus, where has it been introduced, and what habitat does it require?", "kind": "definition" }, { "id": "range-record-q02", "text": "What distinguishes a native record from an introduced or vagrant one?", "kind": "boundary" } ] } ] }, { "id": "protection-status", "name": "Protection and legal status", "description": "Conservation assessments and the rules that follow from them.", "findings": [ { "id": "status-and-rules", "name": "Conservation status and legal consequence", "description": "The assessment, its date, and what it forbids or requires where.", "questions": [ { "id": "status-and-rules-q01", "text": "What conservation status does hypothalamus hold, under which assessment and year?", "kind": "provenance" }, { "id": "status-and-rules-q02", "text": "What does that status forbid or require of an agent, and in which jurisdiction?", "kind": "action" } ] } ] } ] }, { "id": "provenance-and-evidence", "name": "Provenance, evidence and time", "description": "Where every claim about a hypothalamus came from and when it held.", "rationale": "A claim without a source and a time cannot be superseded, only overwritten, and an agent that overwrites loses the ability to explain itself.", "layers": [ { "id": "source-and-authority", "name": "Source and authority", "description": "Who said it, on what evidence, and how strongly.", "findings": [ { "id": "claim-provenance", "name": "Claim provenance and confidence", "description": "The authority behind each claim about a hypothalamus and how confident it is.", "questions": [ { "id": "claim-provenance-q01", "text": "What identifies and describes a claim about a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "claim-provenance-q02", "text": "Who or what asserted this about a claim about a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "claim-provenance-q03", "text": "What may an agent decide or do once a claim about a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] }, { "id": "time-and-versions", "name": "Time, versions and supersession", "description": "When a claim was true, when it was learnt, and what replaced it.", "findings": [ { "id": "validity-and-supersession", "name": "Validity period and supersession", "description": "How an old claim about a hypothalamus is retired without being erased.", "questions": [ { "id": "validity-and-supersession-q01", "text": "What identifies and describes the validity of a claim about a hypothalamus, and in what units or vocabulary?", "kind": "definition", "answer_data": [ "identifiers", "types and classes", "values with units", "explicit unknowns" ] }, { "id": "validity-and-supersession-q02", "text": "Who or what asserted this about the validity of a claim about a hypothalamus, by which method, and when was it true?", "kind": "provenance", "answer_data": [ "authority", "method", "evidence", "event time", "knowledge time" ] }, { "id": "validity-and-supersession-q03", "text": "What may an agent decide or do once the validity of a claim about a hypothalamus is known, and what must it refuse?", "kind": "action", "answer_data": [ "permitted actions", "preconditions", "refusals", "escalation" ] } ] } ] } ] } ] }, "statistics": { "bundles": 8, "layers": 17, "findings": 19, "questions": 51 } } } }