{ "vercy": "1.0-draft", "publication": { "status": "research-draft", "adjudicationStatus": "unreviewed", "publishableCanonical": false, "generatedAt": "2026-09-12T09:31:05Z", "providers": [ "Codex" ], "breadth": "recalled by Codex without web access - no source was read", "missingProviders": [], "pass": 2, "cost": { "grok": { "seconds": 21.0, "error": "Reading additional input from stdin...\nOpenAI Codex v0.153.4\n--------\nworkdir: R:\\02_PROJECTS\\02_Meta_Models_Platforms\\Ver.cy\\current\\thing-registry-backlog\nmodel: gpt-6-astra\nprovider: openai\napproval: never\nsandbox: read-only\nreasoning effort: none\nreasoning summaries: none\nsession id: 01a094f3-8d8e-72c2-ae95-4c65cfc04402\n--------\nuser\nDescribe what is already known about one registered thing. Answer as JSON only, no prose around it.\n\nThing: epimysium\nSense to describe: (none recorded)\nDomain code: PHY.LIV\nAlso known as: (none)\n\n\nContext for this batch of 1001 things:\n# Batch 043: 1001 regis", "usd": 0.0, "recall": true }, "codex": { "seconds": 81.6, "error": "Reading additional input from stdin...\nOpenAI Codex v0.153.4\n--------\nworkdir: R:\\02_PROJECTS\\02_Meta_Models_Platforms\\Ver.cy\\current\\thing-registry-backlog\nmodel: gpt-6-astra\nprovider: openai\napproval: never\nsandbox: read-only\nreasoning effort: none\nreasoning summaries: none\nsession id: 01a094f3-8d89-71f1-8da5-b7180db2f861\n--------\nuser\nYou are drafting a Vercy meta-model for one registered thing. Answer as JSON only, no prose around it.\n\nThing: epimysium\nRegistry id: vr.tr.epimysium\nPlane / domain: PHY / PHY.LIV\nRegistry definition: (none recorded)\nNames folded into this entry: (none)\n\n\nCont" } }, "enrichment": { "pass": 3, "engine": "claude", "producedAt": "2026-10-06T12:00:00Z", "ingestedAt": "2026-10-06T08:49:49+00:00", "fields": [ "agent_conduct", "ethics", "failure_modes_and_hazards", "owners", "visual_identification" ] }, "gate": { "passed": true, "version": "1.0", "at": "2026-10-07T10:10:28+00:00", "evidence": [ "completeness 1.00", "sense: Wikidata description", "2 live sources", "review by codex: pass" ] } }, "metaModel": { "id": "THING-Q2325957", "registryId": "vr.tr.epimysium", "name": "epimysium", "version": "0.1.0-research.1", "entryKind": "thing", "family": "Thing Registry", "domain": [ "PHY.LIV" ], "status": "research-draft" }, "canonicalUrl": "https://ver.cy/models/thing/q2325957/", "model": { "registry_id": "vr.tr.epimysium", "name": "epimysium", "purpose": "Enable an agent to identify epimysium, assess its structural and mechanical condition, and determine what further observation or handling its evidence supports.", "definition": "The epimysium is the collagen-rich connective tissue sheath surrounding an entire skeletal muscle, continuous with its internal connective tissue network and contributing to structural support and force transmission.", "scope_statement": "This model owns epimysium (vr.tr.epimysium): the connective tissue envelope of an individual skeletal muscle, including its regional architecture, tissue interfaces, mechanical behavior and observed alterations; it models an anatomical tissue component, not an organism.", "in_scope": [ "Identification of the epimysial envelope belonging to a specified skeletal muscle", "Regional thickness, collagen organization and envelope continuity", "Boundaries and connections with perimysium, surrounding fascia and tendinous structures", "Epimysial deformation and contributions to muscle-surface force transmission", "Observed injury, remodeling and specimen-related changes" ], "out_of_scope": [ "Whole-organism taxonomy, life history and conservation status", "Muscle-fiber excitation, contraction and metabolism", "Endomysium and perimysium except at their interfaces with epimysium", "Deep fascia, tendons and aponeuroses as independently modeled structures", "Diagnosis and treatment of whole-muscle or systemic diseases" ], "distinguishing_features": [ "An epimysial identification requires evidence that the tissue belongs to the outer envelope of a muscle rather than a connective tissue partition within it.", "A sheath enclosing an internal fascicle is perimysium; a sheath around an individual muscle fiber is endomysium.", "Connective tissue spanning a compartment or multiple muscles must be distinguished from the envelope assigned to one muscle; local continuity does not establish identical anatomical boundaries.", "A collagenous sheet at a muscle surface is not automatically epimysium: its relationship to an aponeurosis or tendon must be traced.", "Epimysium is extracellular connective tissue containing resident cells, not the sarcolemma of a muscle fiber." ], "characteristics": [ { "name": "Host muscle and sampled region", "kind": "relation", "unit_or_values": "Species, individual or specimen, named muscle, side, surface and proximal-distal location", "why_it_matters": "Epimysial observations require anatomical localization before they can be compared or generalized." }, { "name": "Boundary confidence", "kind": "state", "unit_or_values": "Confirmed; probable; unresolved, with anatomical evidence and terminology convention", "why_it_matters": "Apposed fascia or aponeurosis can otherwise be included in an epimysial observation." }, { "name": "Envelope thickness", "kind": "measurement", "unit_or_values": "Micrometres, with region, section orientation, preparation method and distribution", "why_it_matters": "Supports regional comparison while exposing sectioning and preparation effects." }, { "name": "Collagen orientation", "kind": "measurement", "unit_or_values": "Angular distribution in degrees relative to the local muscle long axis, with imaging method", "why_it_matters": "Connects tissue architecture to the direction of applied loading." }, { "name": "Envelope integrity", "kind": "state", "unit_or_values": "Continuous; partially disrupted; discontinuous; not assessable, with defect location and extent", "why_it_matters": "Distinguishes intact envelope from damage or incomplete sampling." }, { "name": "Interface relationship", "kind": "relation", "unit_or_values": "Named neighboring structure; continuous, attached, separable or unresolved; supporting observation", "why_it_matters": "Identifies potential mechanical connections and establishes dissection boundaries." }, { "name": "Mechanical response", "kind": "measurement", "unit_or_values": "Force in N, displacement in mm, strain as a dimensionless ratio, and stress in kPa or MPa when geometry is known", "why_it_matters": "Characterizes behavior under specified loading without assigning whole-muscle properties to isolated epimysium." }, { "name": "Observed tissue alteration", "kind": "state", "unit_or_values": "No alteration detected; thickening; collagen disorganization; disruption; abnormal adherence; indeterminate", "why_it_matters": "Records observations without treating any single appearance as a diagnosis." }, { "name": "Preparation condition", "kind": "category", "unit_or_values": "In situ; fresh excised; frozen-thawed; fixed; sectioned, with elapsed time and hydration conditions", "why_it_matters": "Preparation changes can affect dimensions, separability and mechanical measurements." } ], "affordances": [ "Annotate the epimysial envelope and mark uncertain boundaries on a localized anatomical observation.", "Design regional sampling that retains landmarks needed to distinguish epimysium from adjoining tissues.", "Compare thickness and collagen organization across anatomically and methodologically matched samples.", "Specify a mechanical test with explicit loading direction, retained attachments and specimen condition.", "Flag discontinuities or altered interfaces for expert review and additional observation.", "Assess whether a specimen supports isolated epimysium analysis or only analysis of a composite tissue layer." ], "agent_conduct": { "may": [ "Describe the epimysium and its role in muscle structure from reliable sources.", "Label it on anatomical diagrams and educational images." ], "must_not": [ "Diagnose muscle injuries or compartment problems in a particular person.", "Advise a person to ignore severe muscle pain and swelling after injury instead of seeking urgent care.", "Present identifiable patient images or tissue samples without consent." ], "requires_human": [ "Any surgical or clinical decision involving muscle sheaths." ] }, "ethics": { "considerations": [ "Muscle compartment problems can become emergencies, and delay causes lasting harm.", "Human tissue used in teaching and research needs consent." ], "affected_parties": [ "Patients with muscle injuries", "Athletes", "Clinicians" ] }, "owners": { "steward": "Nobody owns it; it is part of each person's body, and the treating clinician answers for its care.", "master_systems": [] }, "visual_identification": [ "A thin, shiny, whitish sheath wrapping the outside of a whole muscle.", "Continuous with tendons at the ends of the muscle." ], "failure_modes_and_hazards": [ "Swelling inside tight connective tissue sheaths can compress muscles, vessels and nerves." ], "what_it_is_for": [ "Epimysium is encountered in anatomical dissection, histology and research on skeletal muscle structure and mechanics.", "It surrounds the whole muscle and contributes to structural support and force transmission through the muscle's connective tissue network.", "Distinguishing it from internal connective tissue layers helps interpret tissue samples and anatomical relationships." ], "standards_and_regulation": [ "Terminologia Anatomica, issued by the Federative International Programme for Anatomical Terminology of the International Federation of Associations of Anatomists, standardizes anatomical terminology including epimysium." ] }, "sources": [ { "id": "wikidata", "title": "Wikidata item Q2325957: epimysium", "url": "https://www.wikidata.org/wiki/Q2325957", "url_status": "live", "what_it_supports": "identity and sense of the item", "checked_by": "wikidata-api" }, { "id": "wikipedia-en", "title": "Wikipedia: Epimysium", "url": "https://en.wikipedia.org/wiki/Epimysium", "url_status": "live", "what_it_supports": "general description of the item", "checked_by": "wikidata-api sitelink" } ], "structure": { "bundles": [ { "id": "anatomical-identity", "name": "Anatomical identity", "description": "Establish which muscle envelope is being modeled and how its boundaries were recognized.", "rationale": "An agent must distinguish epimysium from neighboring connective tissues before interpreting any measurement.", "layers": [ { "id": "muscle-envelope-localization", "name": "Muscle envelope localization", "description": "Anchor the tissue to a named muscle and surface region.", "findings": [ { "id": "whole-muscle-envelope", "name": "Whole-muscle envelope", "description": "Epimysium surrounds the muscle organ, whereas perimysium surrounds fascicles and endomysium surrounds individual fibers. [Collagen architecture review](https://pmc.ncbi.nlm.nih.gov/articles/10635663/)", "questions": [ { "text": "Which muscle, side and surface region does this epimysium belong to?", "kind": "definition", "id": "whole-muscle-envelope-q01" }, { "text": "What anatomical observation establishes that the tissue is at the whole-muscle boundary rather than around an internal fascicle?", "kind": "boundary", "id": "whole-muscle-envelope-q02" } ] } ] }, { "id": "adjacent-sheet-discrimination", "name": "Adjacent sheet discrimination", "description": "Resolve potentially conflated muscle-surface connective tissues.", "findings": [ { "id": "epimysium-fascia-aponeurosis-boundary", "name": "Epimysium, fascia and aponeurosis boundary", "description": "Record how the observer distinguishes epimysium from apposed fascia or a surface aponeurosis, retaining uncertainty where no clear separation is demonstrated.", "questions": [ { "text": "Which anatomical convention is used to distinguish epimysium from epimysial fascia or deep fascia at this site?", "kind": "definition", "id": "epimysium-fascia-aponeurosis-boundary-q01" }, { "text": "Can the sheet be traced into a distinct aponeurosis, surrounding fascia or the muscle envelope itself?", "kind": "boundary", "id": "epimysium-fascia-aponeurosis-boundary-q02" } ] } ] } ] }, { "id": "epimysial-architecture", "name": "Epimysial architecture", "description": "Describe the envelope's regional geometry and collagen organization.", "rationale": "A single thickness or generic connective tissue label cannot establish the architecture of the sampled envelope.", "layers": [ { "id": "envelope-geometry", "name": "Envelope geometry", "description": "Locate variation in thickness, coverage and continuity.", "findings": [ { "id": "regional-thickness-and-coverage", "name": "Regional thickness and coverage", "description": "Represent measured thickness and envelope coverage at specified locations, separating true defects from sampling gaps.", "questions": [ { "text": "What thickness distribution is measured at each sampled region, and how was oblique sectioning addressed?", "kind": "measurement", "id": "regional-thickness-and-coverage-q01" }, { "text": "Does an apparent gap represent an anatomical opening, tissue disruption or missing specimen material?", "kind": "boundary", "id": "regional-thickness-and-coverage-q02" } ] } ] }, { "id": "collagen-organization", "name": "Collagen organization", "description": "Describe collagen arrangement in a reproducible anatomical reference frame.", "findings": [ { "id": "orientation-and-composition-evidence", "name": "Orientation and composition evidence", "description": "Record observed collagen orientation and assay-supported composition without inferring molecular identity from routine appearance.", "questions": [ { "text": "How are collagen bundles oriented relative to the local muscle long axis and tissue surface?", "kind": "measurement", "id": "orientation-and-composition-evidence-q01" }, { "text": "Which staining, imaging or biochemical method supports each reported matrix constituent?", "kind": "provenance", "id": "orientation-and-composition-evidence-q02" } ] } ] } ] }, { "id": "attachments-and-mechanics", "name": "Attachments and mechanics", "description": "Connect epimysial interfaces to evidence about deformation and force transfer.", "rationale": "Mechanical interpretation requires knowing which tissue connections remain present and what the test actually loads.", "layers": [ { "id": "interface-topology", "name": "Interface topology", "description": "Map internal and external connective tissue relationships.", "findings": [ { "id": "retained-connective-pathways", "name": "Retained connective pathways", "description": "Distinguish observed continuity with perimysium, tendinous structures and surrounding tissues from pathways assumed on anatomical grounds.", "questions": [ { "text": "Where is continuity with perimysium, tendon or aponeurosis directly demonstrated in this muscle?", "kind": "boundary", "id": "retained-connective-pathways-q01" }, { "text": "Which surrounding attachments were preserved, separated or cut before observation or testing?", "kind": "provenance", "id": "retained-connective-pathways-q02" } ] } ] }, { "id": "loading-dependent-response", "name": "Loading-dependent response", "description": "Interpret epimysial mechanics under explicit experimental conditions.", "findings": [ { "id": "force-pathway-attribution", "name": "Force pathway attribution", "description": "Epimysium can participate in myofascial force transmission, but its contribution must be established for the tested configuration. [Muscle fascia and force transmission](https://pubmed.ncbi.nlm.nih.gov/20850050/)", "questions": [ { "text": "What loading direction, strain range, loading rate and muscle activation or passive condition apply?", "kind": "measurement", "id": "force-pathway-attribution-q01" }, { "text": "What experimental comparison isolates an epimysial contribution from that of muscle fibers, perimysium and adjacent fascia?", "kind": "boundary", "id": "force-pathway-attribution-q02" }, { "text": "Which further test would resolve whether an observed response depends on retained external attachments?", "kind": "action", "id": "force-pathway-attribution-q03" } ] } ] } ] }, { "id": "integrity-and-remodeling", "name": "Integrity and remodeling", "description": "Record structural alterations and the evidence needed to interpret them.", "rationale": "The agent must recognize altered tissue without confusing preparation damage, normal variation and biological change.", "layers": [ { "id": "localized-envelope-damage", "name": "Localized envelope damage", "description": "Characterize discontinuities and establish when they arose.", "findings": [ { "id": "defect-origin-and-extent", "name": "Defect origin and extent", "description": "Locate tears or loss of tissue and distinguish pre-existing defects from dissection or processing artifacts.", "questions": [ { "text": "Where is the defect, what are its dimensions, and does it extend into adjoining connective tissue?", "kind": "measurement", "id": "defect-origin-and-extent-q01" }, { "text": "What observation before excision or processing supports a biological rather than procedural origin?", "kind": "provenance", "id": "defect-origin-and-extent-q02" } ] } ] }, { "id": "matrix-and-interface-change", "name": "Matrix and interface change", "description": "Evaluate altered architecture against an appropriate reference.", "findings": [ { "id": "comparative-remodeling-assessment", "name": "Comparative remodeling assessment", "description": "Treat thickening, disorganization or abnormal adherence as observations requiring context before attributing fibrosis or impaired function.", "questions": [ { "text": "Which matched muscle region and preparation provide the reference for calling this appearance altered?", "kind": "provenance", "id": "comparative-remodeling-assessment-q01" }, { "text": "What additional histological or mechanical evidence is needed before interpreting the alteration as functionally significant remodeling?", "kind": "action", "id": "comparative-remodeling-assessment-q02" } ] } ] } ] }, { "id": "observation-and-specimen-handling", "name": "Observation and specimen handling", "description": "Determine what the available observation can resolve and how the tissue may be examined further.", "rationale": "Thin, adjoining connective tissue layers can be conflated or altered by the methods used to observe them.", "layers": [ { "id": "method-resolution", "name": "Method resolution", "description": "Assess whether the evidence resolves epimysium specifically.", "findings": [ { "id": "epimysium-specific-observability", "name": "Epimysium-specific observability", "description": "Record spatial resolution and anatomical landmarks before assigning an image signal or sampled layer to epimysium.", "questions": [ { "text": "Does the method resolve a distinct epimysial layer or only a combined muscle-surface connective tissue band?", "kind": "boundary", "id": "epimysium-specific-observability-q01" }, { "text": "What dissection, histology or co-registered observation validates the layer assignment?", "kind": "provenance", "id": "epimysium-specific-observability-q02" } ] } ] }, { "id": "sampling-and-preservation", "name": "Sampling and preservation", "description": "Preserve the anatomical and physical context required by the intended analysis.", "findings": [ { "id": "fit-for-purpose-specimen", "name": "Fit-for-purpose specimen", "description": "Select handling that retains necessary interfaces and documents preparation effects relevant to the proposed measurement.", "questions": [ { "text": "Which muscle landmarks and adjacent tissue attachments must remain to answer the intended epimysial question?", "kind": "action", "id": "fit-for-purpose-specimen-q01" }, { "text": "How were hydration, storage, fixation, freezing and time since excision controlled or documented?", "kind": "provenance", "id": "fit-for-purpose-specimen-q02" }, { "text": "Can epimysium be separated without damage, or must the result be reported for a composite specimen?", "kind": "action", "id": "fit-for-purpose-specimen-q03" } ] } ] } ] }, { "id": "evidence-and-external-alignment", "name": "Evidence and external alignment", "description": "What the world already says about this thing, gathered so the model can be checked against it.", "rationale": "A model that cannot be lined up against existing standards, identifiers and practice cannot be adopted by anyone who already uses them.", "layers": [ { "id": "reported-evidence", "name": "Reported evidence", "description": "Findings from the breadth pass, kept separate from the structural claims.", "findings": [ { "id": "evidence-confidence-notes", "name": "Check these first", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Epimysium is an anatomical tissue structure, not an organism or taxon.", "Boundaries between epimysium and adjacent fascia require attention to the particular muscle and terminology used.", "Quantitative thickness and mechanical properties require muscle-specific and species-specific evidence; this description is recalled knowledge, not source-verified research." ], "questions": [ { "id": "evidence-confidence-notes-q01", "text": "Which of these check these first hold for the sense of epimysium this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-standards-and-regulation", "name": "Standards and regulation", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Terminologia Anatomica, maintained by the Federative International Programme for Anatomical Terminology (FIPAT), provides standardized anatomical nomenclature." ], "questions": [ { "id": "evidence-standards-and-regulation-q01", "text": "Which of these standards and regulation hold for the sense of epimysium this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-real-world-use", "name": "Real-world use", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Anatomical dissection and histology distinguish the whole-muscle covering from connective tissue surrounding fascicles and individual muscle fibers.", "Muscle biomechanics examines its contribution to force transmission and passive mechanical behavior.", "Surgical anatomy considers its relationship to adjacent fascia, tendons, and muscle boundaries." ], "questions": [ { "id": "evidence-real-world-use-q01", "text": "Which of these real-world use hold for the sense of epimysium this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-measurements", "name": "Typical measurements", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ { "quantity": "Epimysial thickness", "typical_range": "Depends on the muscle, species, anatomical location, and preparation; no universal typical range is given.", "unit": "µm" } ], "questions": [ { "id": "evidence-measurements-q01", "text": "Which of these typical measurements hold for the sense of epimysium this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-failure-modes-and-hazards", "name": "Failure modes and hazards", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Traumatic disruption can affect the connective tissue continuity of a muscle.", "Fibrotic remodeling can alter muscle stiffness and mechanical behavior." ], "questions": [ { "id": "evidence-failure-modes-and-hazards-q01", "text": "Which of these failure modes and hazards hold for the sense of epimysium this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-neighbours", "name": "Neighbouring kinds and how to tell them apart", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ { "name": "perimysium", "difference": "Perimysium surrounds and partitions muscle fascicles; epimysium surrounds the entire muscle." }, { "name": "endomysium", "difference": "Endomysium surrounds individual muscle fibers; epimysium encloses the whole muscle." }, { "name": "deep fascia", "difference": "Deep fascia forms broader sheets investing and separating anatomical structures; epimysium is the connective tissue covering of a particular muscle, although the tissues may blend." }, { "name": "tendon", "difference": "A tendon is an organized force-transmitting attachment structure; epimysium is a muscle covering that can become continuous with tendon." }, { "name": "sarcolemma", "difference": "The sarcolemma is the plasma membrane of an individual muscle fiber; epimysium is extracellular connective tissue around the whole muscle." } ], "questions": [ { "id": "evidence-neighbours-q01", "text": "Which of these neighbouring kinds and how to tell them apart hold for the sense of epimysium this model covers, and on what evidence?", "kind": "provenance" } ] } ] } ] } ] }, "openQuestions": [ "Which anatomical convention should govern the boundary between epimysium, epimysial fascia and deep fascia across different muscles and species?", "What region-, species- and age-specific reference data exist for epimysial thickness and collagen organization?", "How much force is transmitted through epimysium under physiological conditions, independently of adjacent connective tissue pathways?", "Which observation methods reliably distinguish epimysium from immediately apposed fascia and aponeurosis at each anatomical site?", "What evidence distinguishes adaptive epimysial remodeling from pathological fibrosis, and which changes demonstrably alter function?" ], "statistics": { "bundles": 6, "layers": 11, "findings": 16, "questions": 28 } }