{ "vercy": "1.0-draft", "publication": { "status": "research-draft", "adjudicationStatus": "unreviewed", "publishableCanonical": false, "generatedAt": "2026-09-12T11:18:15Z", "providers": [ "Codex" ], "breadth": "recalled by Codex without web access - no source was read", "missingProviders": [], "pass": 2, "cost": { "grok": { "seconds": 18.3, "error": "Reading additional input from stdin...\nOpenAI Codex v0.153.4\n--------\nworkdir: R:\\02_PROJECTS\\02_Meta_Models_Platforms\\Ver.cy\\current\\thing-registry-backlog\nmodel: gpt-6-astra\nprovider: openai\napproval: never\nsandbox: read-only\nreasoning effort: none\nreasoning summaries: none\nsession id: 01a09555-ef33-72e2-98ec-4ca5bab51bfc\n--------\nuser\nDescribe what is already known about one registered thing. Answer as JSON only, no prose around it.\n\nThing: methylrhenium trioxide anion\nSense to describe: (none recorded)\nDomain code: PHY.MAT\nAlso known as: (none)\n\n\nContext for this batch of 1001 things:\n# Ba", "usd": 0.0, "recall": true }, "codex": { "seconds": 65.3, "error": "Reading additional input from stdin...\nOpenAI Codex v0.153.4\n--------\nworkdir: R:\\02_PROJECTS\\02_Meta_Models_Platforms\\Ver.cy\\current\\thing-registry-backlog\nmodel: gpt-6-astra\nprovider: openai\napproval: never\nsandbox: read-only\nreasoning effort: none\nreasoning summaries: none\nsession id: 01a09555-ef08-7731-8aba-0a286e4f875c\n--------\nuser\nYou are drafting a Vercy meta-model for one registered thing. Answer as JSON only, no prose around it.\n\nThing: methylrhenium trioxide anion\nRegistry id: vr.tr.methylrhenium-trioxide-anion\nPlane / domain: PHY / PHY.MAT\nRegistry definition: (none recorded)\nNames" } }, "enrichment": { "pass": 3, "engine": "claude", "producedAt": "2026-10-06T12:00:00Z", "ingestedAt": "2026-10-06T08:48:58+00:00", "fields": [ "agent_conduct", "ethics", "failure_modes_and_hazards", "owners", "visual_identification" ] }, "gate": { "passed": true, "version": "1.0", "at": "2026-10-07T10:10:30+00:00", "evidence": [ "completeness 1.00", "sense: Wikidata description", "2 live sources", "review by codex: pass" ] } }, "metaModel": { "id": "THING-Q408705", "registryId": "vr.tr.methylrhenium-trioxide-anion", "name": "methylrhenium trioxide anion", "version": "0.1.0-research.1", "entryKind": "thing", "family": "Thing Registry", "domain": [ "PHY.MAT" ], "status": "research-draft" }, "canonicalUrl": "https://ver.cy/models/thing/q408705/", "model": { "registry_id": "vr.tr.methylrhenium-trioxide-anion", "name": "methylrhenium trioxide anion", "purpose": "Enable an agent to resolve the identity of the registered methylrhenium trioxide anion, assess evidence for its charge and chemical state, and determine which properties and actions are justified.", "definition": "Methylrhenium trioxide anion provisionally denotes the molecular anion [CH3ReO3]−, formally obtained by adding one electron to neutral methylrhenium trioxide.", "scope_statement": "This model owns the identity, characterization, environmental state and handling evidence associated with vr.tr.methylrhenium-trioxide-anion, while keeping the unresolved distinction between an anionic species and neutral methylrhenium trioxide explicit.", "in_scope": [ "Resolution of the anion label against charge-explicit structures and original records", "Evidence for methyl-rhenium connectivity, oxygen coordination and electronic state", "Conditions under which the assigned species is observed or maintained", "Composition, counterions and impurities of samples containing the species", "Applicability of physical properties, hazard information and regulatory identifiers" ], "out_of_scope": [ "A complete model of neutral methylrhenium trioxide as a separate substance", "Perrhenate and other rhenium oxoanions lacking the assigned methyl connectivity", "Independent models of counterions, solvents and supporting electrolytes", "Commercial formulations and laboratory equipment", "Complete catalytic processes or synthesis protocols" ], "distinguishing_features": [ "Require explicit evidence of negative net charge; the word 'anion' and an elemental formula alone do not establish ionic identity.", "Test whether the species retains a carbon-rhenium bond rather than merely containing methyl-bearing solvent or an associated organic counterion.", "Resolve hydrogen and oxygen counts to distinguish electron attachment from deprotonation, ligand addition or fragmentation.", "Distinguish an ion observed during instrumental analysis from an independently established species in the original sample.", "Check identifier structures before reuse: the registry label must not automatically inherit the properties of neutral methylrhenium trioxide." ], "characteristics": [ { "name": "Identity resolution", "kind": "state", "unit_or_values": "unresolved label; supported anion assignment; supported neutral assignment; conflicting evidence", "why_it_matters": "Determines whether the entry represents an anion or a naming inconsistency." }, { "name": "Charge-explicit composition", "kind": "category", "unit_or_values": "elemental formula, integer net charge and charge-explicit structure", "why_it_matters": "Separates species that share similar names or elemental compositions." }, { "name": "Rhenium coordination", "kind": "category", "unit_or_values": "supported Re-C connectivity, oxygen ligand types and coordination number; unresolved", "why_it_matters": "Distinguishes the intended methyl oxorhenium species from adducts and decomposition products." }, { "name": "Electronic assignment", "kind": "category", "unit_or_values": "formal oxidation state, spin multiplicity, assignment method and uncertainty", "why_it_matters": "Prevents confusing net ionic charge with oxidation state or assuming the neutral species' electronic structure." }, { "name": "Observation environment", "kind": "category", "unit_or_values": "gas phase; solution; isolated salt; matrix; computational prediction", "why_it_matters": "Controls which stability and physical-property claims are meaningful." }, { "name": "Environmental conditions", "kind": "measurement", "unit_or_values": "temperature in K; pressure in Pa; concentration in mol/L; solvent; pH where applicable", "why_it_matters": "Makes observations of the assigned species comparable and reproducible." }, { "name": "Counterion and association", "kind": "relation", "unit_or_values": "counterion identity, stoichiometry and evidence for ion pairing; absent or unknown", "why_it_matters": "Links condensed-phase observations to the actual salt or solution composition." }, { "name": "Species abundance and persistence", "kind": "measurement", "unit_or_values": "fraction or mol/L with method; observation time or measured lifetime in s", "why_it_matters": "Distinguishes a substantial, persistent species from a trace or transient signal." }, { "name": "Identifier and hazard applicability", "kind": "relation", "unit_or_values": "source record linked to exact ion, salt, neutral compound or mixture", "why_it_matters": "Prevents transferring identifiers and safety classifications across chemically distinct entities." } ], "affordances": [ "Flag contradictory labels, structures and identifiers for registry review.", "Compare analytical evidence against competing neutral, anionic, adduct and fragment assignments.", "Record conditions supporting observation or persistence of the assigned species.", "Associate measurements with the exact ion, salt or mixture actually examined.", "Determine whether proposed handling or use has evidence applicable to that material." ], "agent_conduct": { "may": [ "Describe the anion as a provisional or computational species related to methylrhenium trioxide.", "Point users to the neutral compound's record where that is what they need." ], "must_not": [ "Present the anion as an isolated, commercially available substance.", "Transfer hazard or property data from the neutral compound without saying so.", "Invent structural or spectroscopic data that has not been reported." ], "requires_human": [ "Approving experimental work with organorhenium reagents." ] }, "ethics": { "considerations": [ "A clear record of what has and has not been characterised prevents false confidence in the literature." ], "affected_parties": [ "Researchers relying on the record", "Database curators" ] }, "owners": { "steward": "Nobody owns the species; the researchers who report it answer for their data.", "master_systems": [] }, "visual_identification": [ "It cannot be identified by sight; evidence for it comes from spectroscopy or computation, not from a handled sample." ], "failure_modes_and_hazards": [ "Confusing it with the neutral catalyst leads to wrong data in databases.", "Organorhenium chemistry involves reactive and oxidising reagents." ], "what_it_is_for": [ "This provisional designation is relevant to research records concerning the electronic structure or reduction chemistry of methylrhenium trioxide.", "Its use in interpreting calculations or analytical observations requires evidence that the species carries the stated negative charge.", "The designation alone does not establish that an isolable material or practical application exists." ], "facets_not_applicable": { "interfaces": "No species-specific standard or official classification can be confidently assigned to this provisionally identified anion." } }, "sources": [ { "id": "wikidata", "title": "Wikidata item Q408705: methylrhenium trioxide anion", "url": "https://www.wikidata.org/wiki/Q408705", "url_status": "live", "what_it_supports": "identity and sense of the item", "checked_by": "wikidata-api" }, { "id": "wikipedia-en", "title": "Wikipedia: Methylrhenium trioxide", "url": "https://en.wikipedia.org/wiki/Methylrhenium_trioxide", "url_status": "live", "what_it_supports": "general description of the item", "checked_by": "wikidata-api sitelink" } ], "structure": { "bundles": [ { "id": "identity-and-charge-resolution", "name": "Identity and charge resolution", "description": "Resolve what the registered anion name denotes before assigning substance properties.", "rationale": "A charge error changes the modeled entity and invalidates otherwise plausible identifiers and property transfers.", "layers": [ { "id": "registry-name-provenance", "name": "Registry name provenance", "description": "Trace the anion wording to the records and structures behind it.", "findings": [ { "id": "label-structure-conflict", "name": "Label-structure conflict", "description": "The inspected Wikidata record uses the anion label while listing methylrhenium(VII) trioxide aliases and a SMILES without explicit negative charge; this establishes a record inconsistency, not an anion identity. [Wikidata Q408705](https://www.wikidata.org/wiki/Q408705)", "questions": [ { "text": "Which original registry import or source introduced the word 'anion'?", "kind": "provenance", "id": "label-structure-conflict-q01" }, { "text": "Does the intended entry denote neutral methylrhenium trioxide, a specific anion or an unresolved source label?", "kind": "definition", "id": "label-structure-conflict-q02" } ] } ] }, { "id": "charge-and-connectivity", "name": "Charge and connectivity", "description": "Specify the chemical distinctions that an anion assignment must satisfy.", "findings": [ { "id": "explicit-species-assignment", "name": "Explicit species assignment", "description": "Require composition, connectivity and net charge together; treat [CH3ReO3]− as a candidate to investigate rather than an established identity.", "questions": [ { "text": "What experimental evidence establishes negative charge and a retained methyl-rhenium bond?", "kind": "measurement", "id": "explicit-species-assignment-q01" }, { "text": "Does the reported species preserve CH3ReO3 composition or instead involve hydrogen loss, additional ligands or fragmentation?", "kind": "boundary", "id": "explicit-species-assignment-q02" } ] } ] } ] }, { "id": "structural-and-electronic-evidence", "name": "Structural and electronic evidence", "description": "Organize measurements needed to discriminate the proposed anion from chemically adjacent assignments.", "rationale": "A name or mass signal alone cannot settle connectivity, charge origin and electronic state.", "layers": [ { "id": "analytical-discrimination", "name": "Analytical discrimination", "description": "Connect ion signals and structural measurements to competing interpretations.", "findings": [ { "id": "orthogonal-identification", "name": "Orthogonal identification", "description": "Assess mass, isotope pattern and available spectroscopic or structural evidence without treating any unreported signature as known.", "questions": [ { "text": "What measured mass-to-charge ratio, isotope pattern and charge-state evidence support the proposed composition?", "kind": "measurement", "id": "orthogonal-identification-q01" }, { "text": "Which independent measurement distinguishes that assignment from an adduct, fragment or neutral precursor?", "kind": "measurement", "id": "orthogonal-identification-q02" } ] } ] }, { "id": "electron-count-and-spin", "name": "Electron count and spin", "description": "Keep formal electronic bookkeeping separate from measured electronic behavior.", "findings": [ { "id": "electronic-state-support", "name": "Electronic state support", "description": "Record oxidation-state and spin assignments with their assumptions, distinguishing calculations from observations.", "questions": [ { "text": "Which ligand-charge assumptions support the proposed rhenium oxidation state?", "kind": "definition", "id": "electronic-state-support-q01" }, { "text": "What magnetic, spectroscopic or computational evidence supports the assigned spin and location of added electron density?", "kind": "measurement", "id": "electronic-state-support-q02" } ] } ] } ] }, { "id": "environment-and-species-persistence", "name": "Environment and species persistence", "description": "Describe where the assigned anion occurs and how its identity changes with conditions.", "rationale": "A transient instrumental ion, dissolved species and isolated salt require different state assessments.", "layers": [ { "id": "formation-and-observation", "name": "Formation and observation", "description": "Connect the species assignment to its precursor and observation environment.", "findings": [ { "id": "sample-versus-instrument-origin", "name": "Sample versus instrument origin", "description": "Separate presence in the starting material from generation during ionization or another measurement step.", "questions": [ { "text": "Was the proposed anion present before measurement or generated inside the instrument?", "kind": "provenance", "id": "sample-versus-instrument-origin-q01" }, { "text": "Which precursor, solvent, temperature and charge-generation conditions accompanied its observation?", "kind": "measurement", "id": "sample-versus-instrument-origin-q02" } ] } ] }, { "id": "association-and-transformation", "name": "Association and transformation", "description": "Track counterions, persistence and evidence of conversion to other rhenium species.", "findings": [ { "id": "conditional-stability", "name": "Conditional stability", "description": "Represent persistence as a condition-dependent observation and identify products only where supported.", "questions": [ { "text": "What counterion or charge-balancing environment accompanies the species, and is ion pairing established?", "kind": "boundary", "id": "conditional-stability-q01" }, { "text": "Over what observation period and conditions does the assigned species persist, and which transformation products are confirmed?", "kind": "measurement", "id": "conditional-stability-q02" } ] } ] } ] }, { "id": "material-properties-and-use", "name": "Material properties and use", "description": "Determine which sample properties, identifiers and handling decisions apply to the resolved entity.", "rationale": "Bulk constants and safety records must refer to an actual material form rather than be inherited from the neutral namesake.", "layers": [ { "id": "sample-composition-and-constants", "name": "Sample composition and constants", "description": "Attach purity and physical measurements to the tested salt, solution or other material form.", "findings": [ { "id": "property-attribution", "name": "Property attribution", "description": "Distinguish species-level observations from bulk properties of a sample containing the species.", "questions": [ { "text": "What fraction of the sample is assigned to the anion, and how are neutral precursor and other rhenium species quantified?", "kind": "measurement", "id": "property-attribution-q01" }, { "text": "Do reported thermal, solubility or other constants describe an identified salt, a mixture or neutral methylrhenium trioxide?", "kind": "boundary", "id": "property-attribution-q02" } ] } ] }, { "id": "identifiers-hazards-and-actions", "name": "Identifiers, hazards and actions", "description": "Evaluate identity-specific documentation before applying storage, exposure or use decisions.", "findings": [ { "id": "applicable-documentation", "name": "Applicable documentation", "description": "Require exact-material support for regulatory identifiers, hazard classifications and demonstrated uses; retain missing evidence explicitly.", "questions": [ { "text": "Which CAS, PubChem, EC or safety records explicitly describe the resolved charged species or its identified salt?", "kind": "provenance", "id": "applicable-documentation-q01" }, { "text": "What handling restrictions or proposed uses are supported for this material under the intended conditions?", "kind": "action", "id": "applicable-documentation-q02" } ] } ] } ] }, { "id": "evidence-and-external-alignment", "name": "Evidence and external alignment", "description": "What the world already says about this thing, gathered so the model can be checked against it.", "rationale": "A model that cannot be lined up against existing standards, identifiers and practice cannot be adopted by anyone who already uses them.", "layers": [ { "id": "reported-evidence", "name": "Reported evidence", "description": "Findings from the breadth pass, kept separate from the structural claims.", "findings": [ { "id": "evidence-confidence-notes", "name": "Check these first", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ "Confirm the registry's intended formula and charge: the supplied name alone does not securely establish the chemical identity.", "Do not transfer the neutral compound's catalytic uses, physical constants, identifiers or hazard classifications to the anion.", "The anion's experimental characterization, stability and conditions of existence require verification." ], "questions": [ { "id": "evidence-confidence-notes-q01", "text": "Which of these check these first hold for the sense of methylrhenium trioxide anion this model covers, and on what evidence?", "kind": "provenance" } ] }, { "id": "evidence-neighbours", "name": "Neighbouring kinds and how to tell them apart", "description": "Recalled without web access and unsourced; every item is a lead to verify.", "evidence": [ { "name": "methylrhenium trioxide", "difference": "Neutral CH3ReO3 has no net charge; the provisionally identified anion has the same elemental composition and one additional electron." }, { "name": "perrhenate", "difference": "Perrhenate is ReO4− and contains no methyl group." } ], "questions": [ { "id": "evidence-neighbours-q01", "text": "Which of these neighbouring kinds and how to tell them apart hold for the sense of methylrhenium trioxide anion this model covers, and on what evidence?", "kind": "provenance" } ] } ] } ] } ] }, "openQuestions": [ "Is 'anion' an erroneous registry label for neutral methylrhenium trioxide, or does an original source identify a distinct charged species?", "If a distinct anion is intended, what are its experimentally supported composition, connectivity, charge and electronic state?", "Has the species been established outside an ion-generating instrument, and is any isolated salt documented?", "Which condition-dependent lifetime, composition and physical-property measurements are attributable to the resolved species?", "Which identifiers, hazard classifications and demonstrated uses apply specifically to the resolved entity rather than its neutral namesake?" ], "statistics": { "bundles": 5, "layers": 9, "findings": 10, "questions": 18 } }