{
  "vercy": "1.0-draft",
  "publication": {
    "status": "research-draft",
    "adjudicationStatus": "unreviewed",
    "publishableCanonical": false,
    "generatedAt": "2026-09-12T00:04:30Z",
    "providers": [
      "Claude"
    ],
    "breadth": "written by Claude from model knowledge without web access - no source was read, every claim is a lead to verify",
    "pass": 2,
    "wave": 2,
    "engine": "claude",
    "enrichment": {
      "pass": 3,
      "engine": "claude",
      "producedAt": "2026-10-05T23:45:00Z",
      "ingestedAt": "2026-10-05T20:49:53+00:00",
      "fields": [
        "agent_conduct",
        "ethics",
        "owners"
      ]
    },
    "revisions": [
      {
        "at": "2026-10-08T18:50:54+00:00",
        "engine": "codex",
        "fields": [
          "definition"
        ],
        "answering_review": "e971fb62ebfddb2f897328e9e17469f3e47969507950fe801867328f819525c2"
      }
    ],
    "gate": {
      "passed": true,
      "version": "1.0",
      "at": "2026-10-08T18:54:40+00:00",
      "evidence": [
        "completeness 1.00",
        "sense: Wikidata description",
        "2 live sources",
        "review by codex: pass"
      ]
    }
  },
  "metaModel": {
    "id": "THING-Q7187",
    "registryId": "vr.tr.gene",
    "name": "gene",
    "version": "0.2.0-wave.2",
    "entryKind": "thing",
    "family": "Thing Registry",
    "domain": [
      "PHY.OBJ"
    ],
    "status": "research-draft"
  },
  "canonicalUrl": "https://ver.cy/models/thing/q7187/",
  "model": {
    "registry_id": "vr.tr.gene",
    "name": "gene",
    "purpose": "Let an agent explain genes and how they work, describe inheritance and variation, relate genes to health and biotechnology at a general level, and route personal genetic questions to professionals.",
    "definition": "A unit of heredity consisting of a sequence of DNA, or RNA in some viruses, that encodes a functional product such as a protein or RNA and is passed from parents to offspring, located on chromosomes, plasmids or nonchromosomal viral genomes, regulated in expression and varying between individuals as alleles; genes are the subject of genetics and genomics, are catalogued in databases, and inform medicine, agriculture and biotechnology under ethical and legal frameworks.",
    "what_it_is_for": "Units of heredity.",
    "affordances": [
      "explain gene structure and function",
      "describe inheritance and variation",
      "relate to health and biotechnology",
      "route personal questions"
    ],
    "distinguishing_features": [
      "Hereditary unit",
      "Encodes products",
      "Alleles and variation",
      "Regulated expression"
    ],
    "appearance": "Not visible; sequences within DNA.",
    "visual_identification": [
      "DNA sequence encoding a product",
      "Inherited and variable",
      "A chromosome carries many genes; a genome is the full set"
    ],
    "physical_properties": [
      {
        "quantity": "Sequence length",
        "unit": "nucleotides",
        "typical_range": "",
        "note": "Length is determined from an identified sequence using stated gene boundaries and specifying whether introns and other included regions are counted."
      },
      {
        "quantity": "Guanine and cytosine content",
        "unit": "percent",
        "typical_range": "",
        "note": "Content is calculated as the percentage of identified nucleotides that are guanine or cytosine within the stated gene sequence."
      }
    ],
    "families_and_kinds": [
      "protein-coding genes",
      "non-coding RNA genes",
      "regulatory genes",
      "genes by organism",
      "pseudogenes and mobile elements"
    ],
    "related_models": [
      {
        "relation": "is a kind of",
        "target": "nucleic acid structure",
        "why": "category"
      },
      {
        "relation": "is related to",
        "target": "gene expression",
        "why": "how genes act"
      },
      {
        "relation": "is related to",
        "target": "DNA-binding protein",
        "why": "regulators of genes"
      },
      {
        "relation": "is related to",
        "target": "cloning",
        "why": "molecular cloning of genes"
      }
    ],
    "identifiers": [],
    "standards_and_regulation": [
      "Gene nomenclature standards",
      "Genetic data protection and discrimination laws",
      "Regulation of genetic testing and modification"
    ],
    "failure_modes_and_hazards": [
      "Genetic determinism",
      "Agents giving personal genetic advice",
      "Privacy risks with genetic data"
    ],
    "in_scope": [],
    "out_of_scope": [],
    "characteristics": [],
    "agent_conduct": {
      "may": [
        "Explain what genes are and how inheritance works from reputable sources.",
        "Distinguish genetic influence from genetic determination."
      ],
      "must_not": [
        "Interpret a person's own genetic results as medical advice.",
        "Claim that genes fix intelligence, behaviour or worth.",
        "Share a person's genetic data without consent.",
        "Assist genetic modification outside lawful, approved settings."
      ],
      "requires_human": [
        "Using genetic data in insurance, employment or medical decisions."
      ]
    },
    "ethics": {
      "considerations": [
        "Genetic determinism has fuelled discrimination and eugenics.",
        "Genetic data reveal facts about relatives who did not consent."
      ],
      "affected_parties": [
        "People tested",
        "Their relatives",
        "Groups stereotyped by ancestry"
      ]
    },
    "owners": {
      "steward": "Nobody owns a gene; data controllers answer for genetic data.",
      "master_systems": [
        "Gene and sequence databases"
      ]
    }
  },
  "sources": [
    {
      "id": "wikidata",
      "title": "Wikidata item Q7187: gene",
      "url": "https://www.wikidata.org/wiki/Q7187",
      "url_status": "live",
      "what_it_supports": "identity and sense of the item",
      "checked_by": "wikidata-api"
    },
    {
      "id": "wikipedia-en",
      "title": "Wikipedia: Gene",
      "url": "https://en.wikipedia.org/wiki/Gene",
      "url_status": "live",
      "what_it_supports": "general description of the item",
      "checked_by": "wikidata-api sitelink"
    }
  ],
  "structure": {
    "bundles": [
      {
        "id": "understand",
        "name": "Understand",
        "description": "What genes are.",
        "rationale": "Biology.",
        "layers": [
          {
            "id": "structure",
            "name": "Structure",
            "description": "Structure and function.",
            "findings": [
              {
                "id": "structure-finding",
                "name": "Structure",
                "description": "Structure.",
                "questions": [
                  {
                    "text": "What is a gene, how is it structured with regulatory and coding regions, and how does it encode a product?",
                    "kind": "definition"
                  },
                  {
                    "text": "How is the concept of the gene debated among biologists?",
                    "kind": "boundary"
                  }
                ]
              }
            ]
          },
          {
            "id": "inherit",
            "name": "Inherit",
            "description": "Inheritance and variation.",
            "findings": [
              {
                "id": "inherit-finding",
                "name": "Inherit",
                "description": "Inheritance.",
                "questions": [
                  {
                    "text": "How are genes inherited, and how do alleles and mutations create variation?",
                    "kind": "definition"
                  },
                  {
                    "text": "Which entry fits a specific gene?",
                    "kind": "action"
                  }
                ]
              }
            ]
          }
        ]
      },
      {
        "id": "health",
        "name": "Health",
        "description": "Genes and health.",
        "rationale": "General information.",
        "layers": [
          {
            "id": "disease",
            "name": "Disease",
            "description": "Genetic conditions.",
            "findings": [
              {
                "id": "disease-finding",
                "name": "Disease",
                "description": "Conditions.",
                "questions": [
                  {
                    "text": "How do gene variants relate to genetic conditions and disease risk, according to medical genetics?",
                    "kind": "provenance"
                  },
                  {
                    "text": "Is the user asking about their own genetic results, which needs a genetic counsellor or clinician?",
                    "kind": "boundary"
                  }
                ]
              }
            ]
          },
          {
            "id": "testing",
            "name": "Testing",
            "description": "Genetic testing.",
            "findings": [
              {
                "id": "testing-finding",
                "name": "Testing",
                "description": "Testing.",
                "questions": [
                  {
                    "text": "How does genetic testing work, and which privacy and discrimination protections apply?",
                    "kind": "provenance"
                  },
                  {
                    "text": "Which entry fits genetic testing?",
                    "kind": "action"
                  }
                ]
              }
            ]
          }
        ]
      },
      {
        "id": "apply",
        "name": "Apply",
        "description": "Biotechnology.",
        "rationale": "Applications.",
        "layers": [
          {
            "id": "engineering",
            "name": "Engineering",
            "description": "Genetic modification and editing.",
            "findings": [
              {
                "id": "engineering-finding",
                "name": "Engineering",
                "description": "Engineering.",
                "questions": [
                  {
                    "text": "How are genes cloned, modified and edited in research, agriculture and medicine, and how is this regulated?",
                    "kind": "provenance"
                  },
                  {
                    "text": "What are the attributed positions in ethical debates?",
                    "kind": "provenance"
                  }
                ]
              }
            ]
          },
          {
            "id": "databases",
            "name": "Databases",
            "description": "Gene databases.",
            "findings": [
              {
                "id": "databases-finding",
                "name": "Databases",
                "description": "Databases.",
                "questions": [
                  {
                    "text": "Which databases catalogue genes, and how are genes named?",
                    "kind": "provenance"
                  },
                  {
                    "text": "How can a gene be looked up?",
                    "kind": "action"
                  }
                ]
              }
            ]
          }
        ]
      },
      {
        "id": "learn",
        "name": "Learn",
        "description": "History and teaching.",
        "rationale": "Education.",
        "layers": [
          {
            "id": "history",
            "name": "History",
            "description": "History of the gene.",
            "findings": [
              {
                "id": "history-finding",
                "name": "History",
                "description": "History.",
                "questions": [
                  {
                    "text": "How did the concept of the gene develop from Mendel to molecular biology and genomics?",
                    "kind": "provenance"
                  },
                  {
                    "text": "Which references are standard?",
                    "kind": "provenance"
                  }
                ]
              }
            ]
          },
          {
            "id": "teach",
            "name": "Teach",
            "description": "Teaching.",
            "findings": [
              {
                "id": "teach-finding",
                "name": "Teach",
                "description": "Teaching.",
                "questions": [
                  {
                    "text": "How can genes and inheritance be taught while avoiding genetic determinism?",
                    "kind": "action"
                  },
                  {
                    "text": "Which misconceptions arise?",
                    "kind": "provenance"
                  }
                ]
              }
            ]
          }
        ]
      }
    ]
  },
  "openQuestions": [
    "Should each gene be a separate entry?",
    "How should gene databases be linked?",
    "How should ethical frameworks be linked?"
  ],
  "statistics": {
    "bundles": 4,
    "layers": 8,
    "findings": 8,
    "questions": 16
  }
}