{
  "vercy": "1.0-draft",
  "publication": {
    "status": "research-draft",
    "adjudicationStatus": "unreviewed",
    "publishableCanonical": false,
    "generatedAt": "2026-09-11T13:55:32Z",
    "providers": [
      "Claude"
    ],
    "breadth": "written by Claude from model knowledge without web access - no source was read, every claim is a lead to verify",
    "pass": 2,
    "wave": 1,
    "engine": "claude",
    "enrichment": {
      "pass": 3,
      "engine": "claude",
      "producedAt": "2026-10-05T16:30:00Z",
      "ingestedAt": "2026-10-05T13:30:35+00:00",
      "fields": [
        "agent_conduct",
        "ethics",
        "owners"
      ]
    },
    "revisions": [
      {
        "at": "2026-10-07T11:39:28+00:00",
        "engine": "codex",
        "fields": [
          "definition",
          "distinguishing_features",
          "visual_identification"
        ],
        "answering_review": "3cf46a85bbc32dc01db4ff7f7208321706e6ed9cf85c92510cb504fc5a26db7c"
      }
    ],
    "gate": {
      "passed": true,
      "version": "1.0",
      "at": "2026-10-07T12:16:34+00:00",
      "evidence": [
        "completeness 1.00",
        "sense: Wikidata description",
        "2 live sources",
        "review by codex: pass"
      ]
    }
  },
  "metaModel": {
    "id": "THING-Q7868",
    "registryId": "vr.tr.cell",
    "name": "cell",
    "version": "0.2.0-wave.1",
    "entryKind": "thing",
    "family": "Thing Registry",
    "domain": [
      "PHY.OBJ"
    ],
    "status": "research-draft"
  },
  "canonicalUrl": "https://ver.cy/models/thing/q7868/",
  "model": {
    "registry_id": "vr.tr.cell",
    "name": "cell",
    "purpose": "Let an agent explain cells by type, structure, function, division and study methods, and separate other senses of cell.",
    "definition": "The cell is the basic structural and functional unit of all known living organisms, enclosed by a membrane and arising from pre-existing cells; cells are prokaryotic, as in bacteria and archaea, or eukaryotic, as in plants, animals and fungi, with eukaryotic cells typically containing a nucleus and membrane-bound organelles, although some specialized cells lose their nucleus and mature mammalian red blood cells lack genetic material.",
    "what_it_is_for": "Biology, medicine and biotechnology.",
    "affordances": [
      "compare prokaryotic and eukaryotic cells",
      "describe organelles and their functions",
      "explain cell division",
      "separate other senses of cell"
    ],
    "distinguishing_features": [
      "Cells are the basic structural and functional units of living organisms.",
      "Cells are enclosed by a membrane.",
      "Cells generally contain DNA, although specialized exceptions include mature mammalian red blood cells.",
      "Cells arise from pre-existing cells."
    ],
    "appearance": "Microscopic units seen under light and electron microscopes, with membranes, nuclei and organelles.",
    "visual_identification": [
      "Cells can appear as membrane-bound units under a microscope.",
      "Eukaryotic cells typically contain a nucleus, but some specialized cells lack one.",
      "Viruses are not cells."
    ],
    "physical_properties": [
      {
        "quantity": "Cell diameter",
        "unit": "micrometers",
        "typical_range": "",
        "note": "Diameter is measured using calibrated microscopy with the cell type, preparation method and measurement axis recorded."
      },
      {
        "quantity": "Cell volume",
        "unit": "cubic micrometers",
        "typical_range": "",
        "note": "Volume is measured by three-dimensional microscopy or estimated from measured dimensions using an explicitly stated shape model."
      },
      {
        "quantity": "Cell dry mass",
        "unit": "picograms",
        "typical_range": "",
        "note": "Dry mass is estimated using calibrated quantitative phase microscopy or measured from dried cell samples with the method recorded."
      }
    ],
    "families_and_kinds": [
      "prokaryotic cells",
      "animal cells",
      "plant cells",
      "fungal cells",
      "stem cells and specialised cells"
    ],
    "related_models": [
      {
        "relation": "is a kind of",
        "target": "biological component",
        "why": "category"
      },
      {
        "relation": "contains",
        "target": "ribosomal RNA",
        "why": "component"
      },
      {
        "relation": "undergoes",
        "target": "cellular respiration",
        "why": "process"
      },
      {
        "relation": "is studied by",
        "target": "cell biology",
        "why": "field"
      }
    ],
    "identifiers": [],
    "standards_and_regulation": [
      "Biosafety rules for cell culture",
      "Regulation of stem cell research and therapies"
    ],
    "failure_modes_and_hazards": [
      "Unproven stem cell treatments",
      "Contaminated cell cultures",
      "Confusing cells and viruses"
    ],
    "in_scope": [],
    "out_of_scope": [],
    "characteristics": [],
    "agent_conduct": {
      "may": [
        "Explain cell structure and function, citing biological sources.",
        "Analyse cell images or data it is authorized to use in research."
      ],
      "must_not": [
        "Use human cells or cell lines without the consent and approvals required.",
        "Assist in creating or enhancing dangerous pathogens or harmful cell lines.",
        "Present preliminary cell research as a proven treatment.",
        "Share data that could identify a cell donor."
      ],
      "requires_human": [
        "Any use of human cells in research or therapy.",
        "Releasing genetically modified cells outside containment."
      ]
    },
    "ethics": {
      "considerations": [
        "Human cell lines have been taken without consent, as in historic cases; donors deserve recognition.",
        "Unproven stem cell treatments exploit desperate patients."
      ],
      "affected_parties": [
        "Cell donors and their families",
        "Patients",
        "Researchers"
      ]
    },
    "owners": {
      "steward": "Nobody owns cells as such; biobanks and laboratories answer for the cells they hold.",
      "master_systems": [
        "Cell line and biobank registries"
      ]
    }
  },
  "sources": [
    {
      "id": "wikidata",
      "title": "Wikidata item Q7868: cell",
      "url": "https://www.wikidata.org/wiki/Q7868",
      "url_status": "live",
      "what_it_supports": "identity and sense of the item",
      "checked_by": "wikidata-api"
    },
    {
      "id": "wikipedia-en",
      "title": "Wikipedia: Cell (biology)",
      "url": "https://en.wikipedia.org/wiki/Cell_%28biology%29",
      "url_status": "live",
      "what_it_supports": "general description of the item",
      "checked_by": "wikidata-api sitelink"
    }
  ],
  "structure": {
    "bundles": [
      {
        "id": "types",
        "name": "Types",
        "description": "Kinds of cells.",
        "rationale": "Cells differ.",
        "layers": [
          {
            "id": "compare",
            "name": "Compare",
            "description": "Prokaryote and eukaryote.",
            "findings": [
              {
                "id": "compare-finding",
                "name": "Compare",
                "description": "Comparison.",
                "questions": [
                  {
                    "text": "How do prokaryotic and eukaryotic cells differ?",
                    "kind": "definition"
                  },
                  {
                    "text": "Which organisms have each?",
                    "kind": "provenance"
                  }
                ]
              }
            ]
          },
          {
            "id": "specialised",
            "name": "Specialised",
            "description": "Cell types.",
            "findings": [
              {
                "id": "specialised-finding",
                "name": "Specialised",
                "description": "Specialised cells.",
                "questions": [
                  {
                    "text": "What is this specialised cell type, and what does it do?",
                    "kind": "definition"
                  },
                  {
                    "text": "Which Cell Ontology term describes it?",
                    "kind": "provenance"
                  }
                ]
              }
            ]
          }
        ]
      },
      {
        "id": "structure",
        "name": "Structure",
        "description": "Organelles.",
        "rationale": "Structure supports function.",
        "layers": [
          {
            "id": "organelles",
            "name": "Organelles",
            "description": "Parts.",
            "findings": [
              {
                "id": "organelles-finding",
                "name": "Organelles",
                "description": "Organelles.",
                "questions": [
                  {
                    "text": "What do the nucleus, mitochondria, ribosomes and other organelles do?",
                    "kind": "definition"
                  },
                  {
                    "text": "Which are found only in plant cells?",
                    "kind": "definition"
                  }
                ]
              }
            ]
          },
          {
            "id": "membrane",
            "name": "Membrane",
            "description": "Cell membrane.",
            "findings": [
              {
                "id": "membrane-finding",
                "name": "Membrane",
                "description": "Cell membrane.",
                "questions": [
                  {
                    "text": "How does the cell membrane control what enters and leaves?",
                    "kind": "definition"
                  },
                  {
                    "text": "What role do sterols play?",
                    "kind": "definition"
                  }
                ]
              }
            ]
          }
        ]
      },
      {
        "id": "life",
        "name": "Life cycle",
        "description": "Division and death.",
        "rationale": "Cells divide and die.",
        "layers": [
          {
            "id": "division",
            "name": "Division",
            "description": "Mitosis and meiosis.",
            "findings": [
              {
                "id": "division-finding",
                "name": "Division",
                "description": "Cell division.",
                "questions": [
                  {
                    "text": "How do mitosis and meiosis differ?",
                    "kind": "definition"
                  },
                  {
                    "text": "What controls the cell cycle?",
                    "kind": "definition"
                  }
                ]
              }
            ]
          },
          {
            "id": "therapies",
            "name": "Therapies",
            "description": "Stem cells.",
            "findings": [
              {
                "id": "therapies-finding",
                "name": "Therapies",
                "description": "Stem cell therapies.",
                "questions": [
                  {
                    "text": "Is this stem cell treatment approved by regulators?",
                    "kind": "provenance"
                  },
                  {
                    "text": "Is the user considering an unproven clinic treatment?",
                    "kind": "boundary"
                  }
                ]
              }
            ]
          }
        ]
      },
      {
        "id": "senses",
        "name": "Senses",
        "description": "Disambiguation.",
        "rationale": "Cell has many senses.",
        "layers": [
          {
            "id": "technical",
            "name": "Technical",
            "description": "Batteries and spreadsheets.",
            "findings": [
              {
                "id": "technical-finding",
                "name": "Technical",
                "description": "Technical senses.",
                "questions": [
                  {
                    "text": "Is a battery cell, solar cell or spreadsheet cell meant?",
                    "kind": "boundary"
                  },
                  {
                    "text": "Which entry fits?",
                    "kind": "action"
                  }
                ]
              }
            ]
          },
          {
            "id": "other",
            "name": "Other",
            "description": "Prison and phone.",
            "findings": [
              {
                "id": "other-finding",
                "name": "Other",
                "description": "Other senses.",
                "questions": [
                  {
                    "text": "Is a prison cell, a mobile phone or a small group cell meant?",
                    "kind": "boundary"
                  },
                  {
                    "text": "Which entry fits?",
                    "kind": "action"
                  }
                ]
              }
            ]
          }
        ]
      }
    ]
  },
  "openQuestions": [
    "Should cell types be separate entries?",
    "How should cell ontologies be linked?",
    "How should other senses be split off?"
  ],
  "statistics": {
    "bundles": 4,
    "layers": 8,
    "findings": 8,
    "questions": 16
  }
}
