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Research draft

L-tyrosine

vr.tr.l-tyrosine · PHY.MAT

Enable an AI agent to recognise L-tyrosine, assess the identity and condition of material containing it, and determine which handling or use actions are supported by evidence.

Thing Registry Physical world and living systems

Research draft, second pass

A second pass drafted this model: the structure a model of this thing needs, and what is known about it in the world. The line under this one says how the second half was obtained - researched against sources, or recalled without web access, in which case nothing here was read anywhere and every claim is a lead to verify. Unreviewed either way.

Researched by: Codex + Grok

Purpose and description

Enable an AI agent to recognise L-tyrosine, assess the identity and condition of material containing it, and determine which handling or use actions are supported by evidence.

L-Tyrosine is the proteinogenic L-enantiomer of 2-amino-3-(4-hydroxyphenyl)propanoic acid (4-hydroxyphenylalanine), a polar aromatic amino acid encoded by UAC/UAU that animals make from L-phenylalanine and that is the metabolic precursor of catecholamines, thyroid hormones and melanin.

It can be Resolve a tyrosine-labelled material to confirmed L-tyrosine, a mixture or an unresolved identity.; Select identity and purity tests that address stereochemistry, positional isomers and free-versus-bound material.; Calculate the required material amount from measured content, water basis and requested concentration.; Prepare and verify a solution or suspension under recorded solvent, pH and temperature conditions.; Compare batch evidence with the requirements of a named analytical, manufacturing or formulation use.; Quarantine, retest or release material when condition changes or evidence gaps affect that use..

Distinguishing features

Confirm the structure of (2S)-2-amino-3-(4-hydroxyphenyl)propanoic acid, rather than accepting an unqualified 'tyrosine' label. [ChEBI](https://www.ebi.ac.uk/chebi/searchFreeText.do?searchString=17895)

Use stereochemistry-resolving evidence to distinguish L-tyrosine from D-tyrosine or a DL mixture; molecular formula alone cannot establish the L configuration. [PubChem](https://pubchem.ncbi.nlm.nih.gov/compound/tyrosine)

Establish that the ring hydroxyl occupies the para position; L-m-tyrosine instead has its hydroxyl at position 3. [PubChem L-m-tyrosine](https://pubchem.ncbi.nlm.nih.gov/compound/6950578)

Check molecular connectivity and the analytical preparation to distinguish free L-tyrosine from a tyrosyl group in a larger molecule. [ChEBI L-tyrosyl group](https://www.ebi.ac.uk/chebi/searchId.do?chebiId=32764)

Use the reference formula C9H11NO3 as a consistency check, alongside structure-specific evidence, when distinguishing L-tyrosine from differently composed substances. [PubChem](https://pubchem.ncbi.nlm.nih.gov/compound/tyrosine)

Scope

+ Chemical identity, para-hydroxyl substitution and L stereochemistry

+ Evidence distinguishing free L-tyrosine from bound residues and modified compounds

+ Batch composition, chemical assay, enantiomeric composition and impurities

+ Solid or dissolved state, concentration and preparation conditions

+ Storage history, condition changes and evidence supporting a proposed material use

- Protein sequences, residue positions and protein modification states

- Independent substance models for D-tyrosine, positional isomers and covalent derivatives

- Finished supplement formulations, packaging and commercial product claims

- Patient-specific dosing, diagnosis and treatment decisions

- Whole-organism metabolism and regulation of biosynthetic pathways

Characteristics

Identity evidence
Reference structure, analytical report, method and tested sample Connects the claimed identity to evidence that can resolve relevant alternatives.
Stereochemical composition
L and D mole fractions or enantiomeric excess, with method and detection limits Separates confirmation of tyrosine from confirmation of L-tyrosine.
Molecular context
Free amino acid; ionic form with specified counterions; covalent derivative; bound residue; unresolved Determines whether the material belongs directly to this model or requires a related substance or macromolecule model.
L-tyrosine content
Mass fraction, mg/g or mol/L, with as-received or dry basis and assay selectivity Supports material accounting without equating nominal ingredient mass with measured L-tyrosine.
Related substances and contaminants
Named analytes in %, mg/kg or method-appropriate units, including reporting limits Allows suitability decisions to distinguish stereochemical impurities, other organic compounds and process contaminants.
Physical presentation
Powder; crystalline solid; solution; suspension; mixture; unresolved Determines sampling, weighing, dissolution and homogeneity requirements.
Solution conditions
pH, temperature in °C, solvent composition and concentration in mol/L or g/L Makes dissolution and concentration observations interpretable and reproducible.
Water content
% mass fraction with method; distinguish water-specific testing from loss on drying Supports assay-basis conversion and investigation of changes in solid material.
Batch and processing provenance
Supplier lot, production route if known, certificate, sampling record and preparation history Links analytical evidence and processing effects to the particular material being considered.
Use eligibility
Unassessed; supported for named use; conditionally supported; quarantined; rejected Keeps suitability specific to an evidenced use and acceptance specification.

Also called

tyrosine phosphorylation

Where this came from

wikidata · CC0 1.0

Drafted structure

Bundle to layer to finding to question, as the second pass will find it: 6 bundles · 11 layers · 18 findings · 38 questions.

Molecular identity and boundaries Establishes which chemical entity a record denotes and whether the observed material supports that identity.

A tyrosine name or formula does not by itself settle stereochemistry, substitution position or molecular context.

Structure and stereochemistry

Separates structural identification from confirmation of the L configuration.

Identity resolution

Record the claimed structure and evidence capable of excluding the relevant tyrosine alternatives.

  1. Does the reference identity specify para-hydroxyphenylalanine with the L configuration? definition
  2. Which measurements distinguish this sample from D-tyrosine, DL-tyrosine and other hydroxyl-position isomers? measurement
  3. Which identity claims rely only on a label or certificate rather than a sample-specific test? provenance

Free substance and related entities

Places ionic forms, covalent modifications and bound tyrosine in explicit relationships to the registered substance.

Molecular context boundary

Record whether the observation concerns free L-tyrosine, a specified ionic preparation or tyrosine incorporated into another entity.

  1. Is the material free L-tyrosine, a counterion-containing preparation, a covalent derivative or a bound residue? boundary
  2. Was the reported tyrosine present before analysis, or released by hydrolysis during sample preparation? provenance
  3. Which related model owns any derivative, protein or finished formulation associated with this record? boundary
Composition and analytical confidence Describes how much L-tyrosine is present and which analytical uncertainties limit that statement.

Total tyrosine, L-tyrosine content and overall chemical purity must remain distinguishable.

Assay and reporting basis

Makes content results usable for comparison and material calculations.

Interpretable content

Require a selective assay, explicit reporting basis and representative sampling for each content value.

  1. Does the assay measure L-tyrosine specifically, total tyrosine or a less selective response? measurement
  2. Is content reported on an as-received, dried or other corrected basis, and what corrections were applied? measurement
  3. Which sample, reference standard and calibration establish the reported result? provenance

Impurities and method coverage

Separates demonstrated impurity control from substances the testing did not address.

Resolved impurity profile

Record identified impurities, unresolved signals and the limits of the methods used.

  1. What limits or measured values are available for D-tyrosine, related amino acids and positional isomers? measurement
  2. Which process contaminants or residual solvents were tested, and which remain unassessed? measurement
  3. Do unresolved peaks or insufficient detection limits require additional testing before the proposed use? action
Physical state and solution preparation Connects solid-material observations to dissolution, concentration and sampling decisions.

A weighed amount does not establish the dissolved L-tyrosine concentration or homogeneity of a preparation.

Solid presentation

Captures solid-state observations relevant to representative sampling and preparation.

Weighable and representative material

Record water content, particle presentation and heterogeneity when they affect assay or preparation.

  1. What water-content or drying evidence supports the mass basis used for this L-tyrosine solid? measurement
  2. Are caking, particle-size differences or visible heterogeneity affecting sampling or dissolution? measurement
  3. Does the intended operation require solid-form identification or particle-size control beyond the available evidence? action

Dissolution and speciation

Records the conditions under which material is dissolved and the resulting preparation verified.

Verified solution state

Keep nominal loading, dissolved concentration and the effects of acid or base additions explicit.

  1. At what solvent composition, pH and temperature was the preparation made and assessed? measurement
  2. Is the stated concentration based on material added or measured dissolved L-tyrosine, and is undissolved material present? measurement
  3. If acid or base was added, what counterions and final conditions must be recorded before using the preparation? action
Provenance and condition over time Tracks how a particular L-tyrosine material was produced, handled and reassessed.

Evidence for one lot or preparation cannot automatically establish the identity or current condition of another.

Lot and preparation lineage

Connects received material and subsequent preparations to their supporting records.

Traceable tyrosine material

Maintain the lineage linking supplier material, tested samples and derived aliquots or solutions.

  1. Which supplier lot and certificate apply to this material, and do they explicitly identify L-tyrosine? provenance
  2. What is known about the production and purification route that could guide impurity testing? provenance
  3. Which dissolution, filtration, drying or other processing steps separate this material from the tested lot? provenance

Storage and reassessment

Relates exposure history and observed changes to evidence for continued suitability.

Condition supported by evidence

Record storage conditions and changes without assigning an unsupported universal shelf life.

  1. What temperature, moisture, light and container exposure history is documented for the solid or solution? provenance
  2. Have colour, precipitation, assay or impurity results changed relative to an established baseline? measurement
  3. Which documented excursion or change triggers retesting, quarantine or disposal under the applicable specification? action
Use-specific material decisions Translates identity, composition and condition evidence into bounded material actions.

L-tyrosine identity alone does not establish suitability for an analytical standard, process input or formulation ingredient.

Intended use and acceptance

Defines the particular operation and evidence needed to accept material for it.

Use-bound eligibility

Attach eligibility to a named use, an explicit specification and the evidence satisfying it.

  1. Is the material intended as an analytical standard, synthesis input, culture-medium component or formulation ingredient? definition
  2. Which identity, stereochemical purity, content and contamination requirements apply to that use? boundary
  3. Which unmet or untested requirement prevents release for the intended operation? action

Quantity and operation controls

Makes preparation and transfer decisions consistent with the actual material and its approved use.

Evidence-based material action

Record the calculation and operating references supporting a proposed handling or preparation step.

  1. What mass or volume supplies the requested L-tyrosine amount after accounting for assay basis and measured concentration? measurement
  2. Which material-specific safety data and procedure govern weighing, transfer, preparation and waste handling? action
  3. Does the request concern material handling, or must a patient-specific administration decision be routed to a clinical model? boundary
Evidence and external alignment What the world already says about this thing, gathered so the model can be checked against it.

A model that cannot be lined up against existing standards, identifiers and practice cannot be adopted by anyone who already uses them.

Reported evidence

Findings from the breadth pass, kept separate from the structural claims.

Kinds and varieties

Reported by the breadth pass; each item needs checking against its source before it becomes normative.

  • Free crystalline L-tyrosine (food, feed, pharmacopeial and supplement grades)
  • Protein residue Tyr/Y in polypeptides
  • N-acetyl-L-tyrosine (soluble parenteral-nutrition form)
  • D-tyrosine and DL-tyrosine (enantiomer and racemate)
  • para-tyrosine versus meta- and ortho-tyrosine (ring positional isomers)
  • O-phospho-L-tyrosine (post-translational modification)
  • 3-iodo- and 3,5-diiodo-L-tyrosine (thyroid-hormone intermediates)
  • 3-nitrotyrosine (nitrative-stress marker)
  1. Which of these kinds and varieties hold for the sense of L-tyrosine this model covers, and on what evidence? provenance

Identifiers and schemes

Reported by the breadth pass; each item needs checking against its source before it becomes normative.

  • Wikidata - Q188017 - item L-tyrosine
  • CAS Registry Number - 60-18-4 - L-enantiomer; DL-tyrosine is 556-03-6
  • PubChem CID - 6057 - L-Tyrosine
  • ChEBI - CHEBI:17895 - L-tyrosine; secondary IDs include CHEBI:46161
  • InChIKey - OUYCCCASQSFEME-QMMMGPOBSA-N - stereospecific L-key; racemate key is OUYCCCASQSFEME-UHFFFAOYSA-N
  • UNII - 42HK56048U - FDA Global Substance Registration System
  • EC / EINECS - 200-460-4 - ECHA InfoCard 100.000.419
  • IUPAC/IUBMB residue codes - Tyr / Y - three-letter and one-letter protein codes; mRNA codons UAC and UAU
  • KEGG COMPOUND - C00082 - L-Tyrosine
  • HMDB - HMDB0000158 - also HMDB0000647
  • DrugBank - DB00135 - tyrosine
  • EPA CompTox - DTXSID1023730 - DSSTox substance id
  1. Which of these identifiers and schemes hold for the sense of L-tyrosine this model covers, and on what evidence? provenance

Standards and regulation

Reported by the breadth pass; each item needs checking against its source before it becomes normative.

  • USP-NF monograph Tyrosine (United States Pharmacopeial Convention): NLT 98.5% and NMT 101.5% l-tyrosine on the dried basis
  • Ph. Eur. monograph 1161 Tyrosine (EDQM): 99.0-101.0% dried substance, product of fermentation or protein hydrolysis
  • Food Chemicals Codex monograph l-Tyrosine (USP FCC)
  • EFSA FEEDAP Scientific Opinion (EFSA Journal 2013;11(7):3310) on L-tyrosine as a feed additive for all animal species
  • EU feed-additive authorisation following that opinion (European Commission / EFSA)
  • US Dietary Supplement Health and Education Act of 1994 (FDA): amino acids may be marketed as dietary supplements without premarket approval of efficacy
  • Norwegian VKM 2016 risk assessment of L-tyrosine as an "other substance" in food supplements (Norwegian Scientific Committee for Food Safety)
  • REACH/CLP listing under EC 200-460-4 (ECHA); TSCA listing in the United States (EPA)
  1. Which of these standards and regulation hold for the sense of L-tyrosine this model covers, and on what evidence? provenance

Real-world use

Reported by the breadth pass; each item needs checking against its source before it becomes normative.

  • Residue in essentially all proteins and in recombinant biologics; one of the 20 standard coded amino acids
  • Oral dietary-supplement powder or capsules, typically taken before acute stress or cognitive load
  • Component of intravenous amino-acid solutions for parenteral nutrition; free tyrosine is poorly soluble so N-acetyl-L-tyrosine is often used instead
  • Conditionally essential nutrient in phenylketonuria, where conversion from phenylalanine is blocked
  • Feed additive, including to support melanin-dependent coat colour in cats
  • Ingredient in cell-culture media and a starting material for peptide synthesis
  • Industrial precursor manufactured by protein hydrolysis (historically feather keratin) or by fermentation with engineered microbes
  • Clinical laboratory analyte in plasma/urine amino-acid profiles and in the work-up of tyrosinemia and PKU
  1. Which of these real-world use hold for the sense of L-tyrosine this model covers, and on what evidence? provenance

Typical measurements

Reported by the breadth pass; each item needs checking against its source before it becomes normative.

  • molar mass - 181.19 - g·mol⁻¹
  • water solubility of the free acid - about 0.45 at 25 °C (Ph. Eur. very slightly soluble); FCC states 1 g in about 230 mL - g·L⁻¹
  • specific optical rotation [α] (USP: 50 mg·mL⁻¹ in 1 N HCl) - −9.8 to −11.2 - °
  • melting / decomposition - >300 (decomposition) - °C
  • pharmacopeial assay (dried substance) - 98.5-101.5 (USP); 99.0-101.0 (Ph. Eur.) - %
  • loss on drying (105 °C) - NMT 0.3 (USP); max 0.5 (Ph. Eur.) - %
  • common labeled oral supplement dose - 500-2000 - mg·day⁻¹
  • EFSA-considered safe feed inclusion - 0.5 of diet (food-producing animals); 1.5 (non-food-producing animals) - %
  1. Which of these typical measurements hold for the sense of L-tyrosine this model covers, and on what evidence? provenance

Failure modes and hazards

Reported by the breadth pass; each item needs checking against its source before it becomes normative.

  • Inborn errors of tyrosine catabolism (tyrosinemia types I-III) cause hepatic, renal and oculocutaneous injury from tyrosine and metabolite accumulation
  • Excess dietary tyrosine in animals can depress growth and cause eye lesions; EFSA flags behavioural changes in young animals at high inclusion
  • Norwegian VKM judged 1250-2000 mg/day in food supplements as a possible health risk across age groups
  • Very low water solubility of the free acid causes precipitation in liquid formulations and complicates parenteral nutrition unless an acetylated form is used
  • EFSA, in the absence of data, treated the feed-grade hydrolysate as potentially irritating to skin and eyes, a potential dermal sensitiser, and hazardous by inhalation
  • In PKU, inadequate tyrosine intake follows from blocked phenylalanine hydroxylation
  • Phenol side-chain oxidation (dityrosine, DOPA, quinones, nitrotyrosine) degrades protein quality and is a stress biomarker rather than a benign impurity
  1. Which of these failure modes and hazards hold for the sense of L-tyrosine this model covers, and on what evidence? provenance

Regional variation

Reported by the breadth pass; each item needs checking against its source before it becomes normative.

  • Commerce and US supplement labels usually say L-Tyrosine; Ph. Eur./BP titles the monograph Tyrosine and require the L-configuration by specific rotation
  • US marketing as a dietary supplement under DSHEA versus EU treatment as a food-supplement "other substance" and as an authorised feed additive after EFSA
  • Parenteral-nutrition practice commonly substitutes N-acetyl-L-tyrosine for free L-tyrosine because of solubility; formula composition still differs by region and product
  • Norwegian risk assessment is more cautious on high-dose supplements than the open US supplement market
  • Industrial origin is specified in Ph. Eur. as fermentation or protein hydrolysis; the 2013 EFSA dossier was a feather-keratin acid hydrolysate
  1. Which of these regional variation hold for the sense of L-tyrosine this model covers, and on what evidence? provenance

Neighbouring kinds and how to tell them apart

Reported by the breadth pass; each item needs checking against its source before it becomes normative.

  • L-phenylalanine - Lacks the para-phenolic hydroxyl; precursor via phenylalanine hydroxylase. Separate by HPLC retention, UV maximum (Tyr ~275 nm vs Phe ~258 nm) and the 4-OH in the molecular formula.
  • L-DOPA (3,4-dihydroxy-L-phenylalanine) - Extra ring hydroxyl (catechol). Distinguish by mass +16 Da versus tyrosine, catechol colour tests, and its use as a dopamine-replacement drug rather than a proteinogenic residue.
  • D-tyrosine - Opposite α-carbon configuration (CAS 556-02-5). Chiral HPLC or USP/Ph. Eur. specific rotation in acid (L is levorotatory, about −10°) separates the enantiomers.
  • DL-tyrosine - Racemate, CAS 556-03-6, InChIKey OUYCCCASQSFEME-UHFFFAOYSA-N. Optical inactivity plus the racemic InChIKey distinguish it from L-tyrosine.
  • m-tyrosine and o-tyrosine - Hydroxyl at ring position 3 or 2 rather than 4; arise from non-enzymatic radical hydroxylation of phenylalanine. Reverse-phase HPLC and aromatic ¹H NMR chemical shifts separate the regioisomers.
  • N-acetyl-L-tyrosine - N-acetylated, much more water-soluble parenteral form; MS +42 Da and different pharmacopeial identity. It is not equivalent on a molar basis as a plasma-tyrosine source.
  1. Which of these neighbouring kinds and how to tell them apart hold for the sense of L-tyrosine this model covers, and on what evidence? provenance

Sources

  1. L-Tyrosine - IUPAC name, formula C9H11NO3, mass, CAS 60-18-4, InChIKey, UNII, EC number, ChEBI, roles as metabolite and nutraceutical
  2. L-tyrosine (CHEBI:17895) - ChEBI definition as the optically active L-form of tyrosine; structure and registry numbers
  3. L-tyrosine (Q188017) - Wikidata item and crosswalk of CAS, InChIKey, UNII, EC number, ChemSpider
  4. Tyrosine - Proteinogenic status, Tyr/Y symbols, codons, dietary sources, ortho/meta isomers, industrial routes, use in supplements and foods
  5. USP-NF monograph Tyrosine - Pharmacopeial identity of l-tyrosine CAS 60-18-4, UNII 42HK56048U, assay 98.5-101.5% dried, specific rotation −9.8° to −11.2°
  6. FCC monograph l-Tyrosine - Food-grade description, formula weight 181.19, solubility statement (1 g in about 230 mL water)
  7. Tyrosine (Ph. Eur. monograph 1161) - European pharmacopeial definition, content 99.0-101.0% dried, appearance and solubility, fermentation or protein-hydrolysis origin
  8. Scientific opinion on the safety and efficacy of L-tyrosine for all animal species - Feed-additive safety limits, production from feather-keratin hydrolysate, animal hazards at high inclusion, coat-colour use in cats
  9. Showing metabocard for L-Tyrosine (HMDB0000158) - Metabolite identity, synonyms including p-tyrosine, CAS, InChIKey, occurrence across organisms
  10. Risk assessment of "other substances" - L-tyrosine - Norwegian food-safety opinion that 1250-2000 mg/day in food supplements may pose a risk in children, adolescents and adults

What the second pass must settle

  • Does an existing Vercy world model already own this concept, and how should this registry entry link to it without duplicating ownership?
  • Which salts, hydrates, ionic representations and isotopically labelled forms should remain contextual forms of this entry rather than separate registered things?
  • Which analytical methods and acceptance limits adequately resolve L-tyrosine from D-tyrosine and positional isomers in the intended sample matrices?
  • What measured solubility and stability evidence supports the actual solvent, pH, temperature, concentration and storage conditions users need?
  • Which use-specific specifications and production-route evidence are available to establish relevant impurity limits and release criteria?