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Research draft

biology

vr.tr.biology · INF.KNW

Let an agent treat biology as a discipline with fields, methods, evidence standards and institutions, separate from the organisms it studies.

Thing Registry Information and virtual systems

Research draft, second pass

A second pass drafted this model: the structure a model of this thing needs, and what is known about it in the world. The line under this one says how the second half was obtained - researched against sources, or recalled without web access, in which case nothing here was read anywhere and every claim is a lead to verify. Unreviewed either way.

written by Claude from model knowledge without web access - no source was read, every claim is a lead to verify

Researched by: Claude

Purpose and description

Let an agent treat biology as a discipline with fields, methods, evidence standards and institutions, separate from the organisms it studies.

The natural science that studies living organisms, their structure, function, growth, evolution, distribution and interactions, from molecules to ecosystems.

What it is for: Understanding life, and grounding medicine, agriculture, conservation and biotechnology.

It can be study and teach it; conduct research, under ethical and biosafety rules; publish and review findings; apply it, in medicine, agriculture and industry.

Distinguishing features

A discipline, not the organisms

Divided into many fields and scales

Relies on experiment, observation and evolution as a unifying theory

Governed by research ethics and biosafety rules

What it looks like

Laboratories, field sites, collections, journals and university departments; the discipline itself has no appearance.

How it is recognised

Research articles, textbooks and courses labelled by field

Institutions and societies in the life sciences

Organisms themselves are separate entries

Related models

is a kind of - alongside physics and chemistry

natural science

studies - animals, plants, fungi, microbes

organism

underpins - applied disciplines

medicine and agriculture

is confused with - the discipline is not its subject

life itself

In practice

Families and kinds

molecular and cell biology

genetics and genomics

physiology and anatomy

ecology and evolution

zoology, botany, microbiology, mycology

applied fields such as forest pathology and animal nutrition

Identifiers

field classification OECD FORD 1.6 Biological sciences research classification

Standards and regulation

Research ethics and animal research law such as EU Directive 2010/63

Biosafety levels and the Biological Weapons Convention

Nagoya Protocol on genetic resources

Failure modes and hazards

Irreproducible results

Biosafety lapses

Dual-use research that could enable harm, which agents must not help with

Also called

pharmacoeconomistMāori agriculture and forestryforest pathologyforest zoologyanimal nutrition sciencecat nutritionMosquito proboscis inspired needlesanti-allergic agentsbiosemioticsbiosemanticszoosemioticsphytosemioticsphytoserologyichnologymetabolomicsgenomicsmultiomicsglycomicsdigital morphologyinvasion biologyplant genomicsFermentation theorycomputational biologyplant nutritionneurobiologyneuropharmacologyneuroanatomyapplied biologyapplied zoologyapplied microbiologyagricultural sciencemicrobiologyaquatic biologyforensic biologyexperimental biologynanobiologybiotypologyneoichnologybird ichnologynmr-based metabolomics

+721

Where this came from

wikidata · CC0 1.0

Also registered as vr.tr.biology

Drafted structure

Bundle to layer to finding to question, as the second pass will find it: 4 bundles · 8 layers · 8 findings · 16 questions.

Scope Fields and scales.

Biology spans molecules to ecosystems; the field locates any claim.

Field

Sub-discipline.

Field

Which field a question belongs to.

  1. Which field of biology does this question belong to? definition
  2. Which neighbouring fields are relevant? definition

Scale

Molecule to ecosystem.

Level of organisation

The level studied.

  1. At which level of organisation is this studied? definition
  2. Does a finding at one level transfer to another? boundary
Methods and evidence How knowledge is made.

Evidence strength decides how far a claim can be trusted.

Methods

Experiment, observation, modelling.

Methods

The method used.

  1. Which method produced this finding? provenance
  2. What are its limitations? boundary

Evidence strength

Replication and review.

Evidence quality

Peer review and replication.

  1. Has the finding been peer reviewed and replicated? provenance
  2. Is it consensus or contested? boundary
Ethics and safety Rules for research.

Research on living things is regulated.

Ethics

Animal and human research.

Ethics approval

Approvals required.

  1. Which ethics approvals did this research need? provenance
  2. How were animals or participants protected? boundary

Biosafety and dual use

Containment and misuse.

Biosafety

Containment and misuse risks.

  1. Which biosafety level applies? boundary
  2. Could this information enable harm, and should it be withheld? boundary
Institutions Where biology is done.

Institutions, journals and societies carry the discipline.

Bodies

Universities, institutes, societies.

Institutions

Key institutions.

  1. Which institutions lead research on this topic? provenance
  2. Which journals publish it? provenance

Education

Courses and qualifications.

Education

How it is taught.

  1. How is this field taught, and at which levels? definition
  2. Which qualifications are recognised? provenance

What the second pass must settle

  • Should fields of biology be separate entries?
  • How should agents assess the strength of biological evidence?
  • How should dual-use limits be represented?